Thermosediminibacter oceani: Toce_0248
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Entry
Toce_0248 CDS
T01289
Name
(GenBank) DNA end-binding protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
toc
Thermosediminibacter oceani
Pathway
toc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Toce_0248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toc03400
]
Toce_0248
DNA repair and recombination proteins [BR:
toc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Toce_0248
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
DZR
ZnF_RZ-type
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
ADL07034
UniProt:
D9S0A6
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All DBs
Position
245310..246134
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AA seq
274 aa
AA seq
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MRALWRGSISFGLVNVPVKMYAATERKSVSFRQIHRECGTPIRYEKVCPACNRKVEDDEI
ARGYEYEKGKFVIIEDKDLESIPDETTRTIDIIDFVNLAEIDPIYFDHSYFLGPEETGQK
AYLLLLKALKETGKIAIAKVMIRAKQSLACLRPYGENRLVMETMFYPDEVRDAGEIPVSP
EVKIHENEIKMAVQLINSLATDFKPEKYTDEYRKALLDIIRAKVEGQDIRIPAPREEKVV
DLMEALKASLAMVEKEKESKKEAAGRGRRKRATS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgcgagctctgtggaggggctctataagcttcggcctggtaaacgtgccggtaaagatg
tacgccgcaaccgaacgaaagagcgtgagcttccggcagatccatagggaatgcggcact
cccatacgctacgaaaaggtatgcccggcgtgcaaccggaaagtcgaggatgatgagata
gcccgggggtacgaatacgaaaagggaaagttcgttataatcgaagacaaagacctggag
agcataccggacgagacaacccgtaccatcgatatcatagattttgtaaacctggcggaa
atagatcccatttattttgaccactcctactttcttgggcccgaagagacagggcagaag
gcttacctgttgctcttaaaagccctgaaggaaaccggaaaaatcgccatagcaaaagtg
atgataagggcgaaacagagcctggcgtgcctcagaccttacggtgaaaaccgcctggtg
atggagactatgttctatcccgatgaggtgagggatgccggtgaaatcccggtttcgccg
gaggtaaaaatccacgagaacgagatcaagatggcggtgcagctcataaactccctggct
accgactttaaacccgagaaatacaccgacgagtacaggaaagctctgctggacataata
agggccaaggtcgaaggtcaggatatcaggatacccgctcccagggaggagaaggtggta
gacctcatggaagccctcaaggcgagcctggccatggtagaaaaggaaaaggagagcaaa
aaagaggccgcaggccgcggcaggaggaagagggccacctcatga
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