Thermodesulfobacterium geofontis: TOPB45_0577
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Entry
TOPB45_0577 CDS
T01547
Name
(GenBank) Crossover junction endodeoxyribonuclease ruvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
top00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TOPB45_0577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
top03400
]
TOPB45_0577
Enzymes [BR:
top01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
TOPB45_0577
DNA repair and recombination proteins [BR:
top03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TOPB45_0577
RecFOR pathway proteins
TOPB45_0577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Ydc2-catalyt
DUF3010
Pox_A22
DUF244
DUF6161
Glyco_trans_4_2
DUF460
Motif
Other DBs
NCBI-ProteinID:
AEH22679
UniProt:
F8C4L3
LinkDB
All DBs
Position
complement(576078..576587)
Genome browser
AA seq
169 aa
AA seq
DB search
MKILGIDPGINNLAYALLEIKNDYYELKDWQTLNTKKCKNVTEKLAYLFNNLKDFIKDSK
PDIIGIEETFTKTYSKAGSRLSQAQAIALLIAGLYNIPVKFLNPLEIKKFLTQYGKAEKE
EIFHILNLFFKEGLIKYQFDLNPDPHKIDALAIALILALEINSQNALST
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttaggaatagatcctggtattaataatttagcctatgcacttcttgaaatc
aaaaatgattattatgaactaaaagattggcaaaccttaaataccaaaaaatgtaaaaat
gtaacagaaaagctcgcttatcttttcaataatttaaaagattttataaaagattctaaa
ccagatataataggaatagaagaaacttttactaaaacctattctaaagcaggaagtaga
ctttctcaagctcaagcaattgctttacttatagcaggactttataatattcctgtaaaa
ttccttaatcccttagaaattaaaaaatttttaacccaatatggaaaagctgaaaaagaa
gaaatttttcatattttaaatctcttttttaaagaaggcttaataaagtaccaatttgat
ttaaatccagatcctcataaaattgatgccttagcaattgctttaattttagccctggag
ataaatagccaaaatgctttatcaacttaa
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