Treponema pallidum subsp. pallidum Nichols: TP_0229
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Entry
TP_0229 CDS
T00016
Name
(GenBank) DNA polymerase, bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Pathway
tpa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TP_0229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpa03400
]
TP_0229
Enzymes [BR:
tpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TP_0229
DNA repair and recombination proteins [BR:
tpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TP_0229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAC65215
UniProt:
O83257
LinkDB
All DBs
Position
237401..238234
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AA seq
277 aa
AA seq
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MQGSGTVMYAVYGRLSPMHAGDRESIARFVRVVRDCLDLFRTEGIGPRPRNDSVILPNAA
CSPRNHAGKRAQSTADACVRSSDGSVYTDETLREEIFACRACELYQRRTHAVVGEGVADA
DVLVVGEAPGAEEDRSGRPFVGRSGKLLDAMLAAIGLSRQQNCYITNVVKCRPPRNRTPT
PHETACCARFLHAHLTLHRPCAILVLGRCAAQHMLQTTDGIGKLRGRFFTYQGIPLLATY
HPSALLRDEALKRPAWEDLKTFRARLLQLKQDAHMPI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggatcgggtaccgtcatgtacgcagtttatggtaggctcagtcctatgcacgct
ggggacagagagagtatcgcacgcttcgtgcgtgtggtgcgcgattgtctggatttgttt
cgcaccgagggtattgggccccgtcctaggaatgattcggtaattttaccgaatgctgcg
tgttcaccgcgtaatcatgcaggaaagcgtgcgcagagcactgccgatgcgtgtgtgaga
agcagtgacgggtctgtatacacggacgaaaccttgcgcgaggaaatttttgcatgccgt
gcgtgtgaattgtatcaacggcgtacacatgcggtggtgggagagggtgttgcagacgca
gacgtgctcgtcgttggggaggcccctggagcggaagaagatcgaagcggtcgtccgttc
gtaggacggtcaggtaaattgctggacgcaatgcttgcggcgattggactttcgcgtcag
caaaattgttatatcaccaatgtggttaagtgccggccgccaaggaaccgcacaccaaca
ccccacgagactgcctgttgtgcacggttcctccatgcgcatcttacgctgcatcgcccg
tgtgctattttggtgctcggccgctgcgccgcacagcacatgctccaaacaaccgatggt
attggcaagttgcgcgggcgcttttttacctatcaggggattccccttctggctacgtac
catccgagtgcgttgttacgggatgaagcgctgaaacgtccggcgtgggaggatctcaaa
acgtttcgtgcacggttgctgcagttgaagcaggacgcacacatgccaatataa
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