Thermoanaerobacter pseudethanolicus: Teth39_0569
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Entry
Teth39_0569 CDS
T00649
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
tpd
Thermoanaerobacter pseudethanolicus
Pathway
tpd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Teth39_0569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpd03400
]
Teth39_0569
DNA repair and recombination proteins [BR:
tpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Teth39_0569
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Teth39_0569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
Kinesin
SWI2_SNF2
P-loop_SecA
Microtub_bd
AAA_22
PHB_depo_C
AAA_16
Med8
Motif
Other DBs
NCBI-ProteinID:
ABY94233
UniProt:
B0K786
LinkDB
All DBs
Position
604342..606327
Genome browser
AA seq
661 aa
AA seq
DB search
MSGFKLVSNFKPTGDQPQAIDKLVEGVKKGYRFQTLLGVTGSGKTFTMANIIQKLNRPTL
VIAHNKTLAAQLYSEFKEFFPDNAVEYFVSYYDYYQPEAYIPQTDTYIEKDASINEEIDK
LRHSATAALFERRDVIIVASVSCIYGLGDPVDYENLMLSLRPGMIKDRDEIIKKLVDIQY
ERNDVNFTRGKFRVRGDVIEIFPASFSNKAIRVELFGDEIDRIAEIDVLTGEVLGLRKHV
AIFPASHYATSKDKLERAIKSIREELEQRYKELKDAGKIVEAERLRQRTNYDLEMLQEMG
YCQGIENYSRHISGRPPGSPPYTLLDYFPKDFLIFIDESHVTIPQIRGMYNGDRSRKEAL
VEYGFRLPSAFDNRPLTFEEFEKRINQVIFVSATPGPYELEHSEQVVEQLIRPTGLIDPE
VIVKPVKGQVDDLIGEIRKTVDKGFRVLVTTLTKKMAEDLTDYLKDMGIKVKYLHSDIET
IERVEIIRDLRLGKFDVLIGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNAEGRVIMYADTVTNSMKRAIDETNRRRKIQMEYNKKHGITPKTVIKGVRDVIEATHV
AEEEQKYRRKKVKTYDPEIIKSTIEQLEKEMKEAAIELQFEKAAKLRDVIFELKKQLEEV
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatttaagttggtatctaattttaaaccaacaggagaccaacctcaagctata
gataaattagttgaaggggtaaaaaaaggatatagatttcaaaccttattgggtgtgacg
ggttctggaaaaacctttactatggctaatataatccagaagttaaatcgtcctactctt
gtcatcgctcataacaagaccttggctgcacaattgtacagcgaatttaaagagtttttt
ccagacaatgcggtagaatattttgtgagttattatgactactaccaaccggaggcttat
ataccccaaactgatacttatattgaaaaagatgcttctataaatgaagaaatagataaa
ttgaggcactctgctacggcagctctttttgagcgaagagacgttataattgtcgccagt
gtttcttgtatatatggcttaggtgaccctgtagattacgaaaatcttatgctttctcta
aggccgggaatgataaaagatagggacgaaataattaaaaagcttgtagatatacaatat
gaaagaaatgatgtgaattttacaagaggcaaattcagggtaagaggagatgttatagaa
attttccctgcttctttttccaataaggcgataagggttgagctttttggagatgaaatt
gacagaatagcggaaattgatgtgttaacaggtgaagtactgggattaagaaaacacgtg
gctatatttccggcttctcactatgctacttcaaaagacaaattggaaagagcgataaaa
agcattcgagaagaactggagcaaaggtacaaagagcttaaagatgctggcaaaatagta
gaggctgaaagactaagacagaggacaaattacgacttagagatgcttcaagagatgggc
tactgccaaggaatagaaaattattcaaggcatatttcaggaagacctccaggaagccct
ccttatactcttttagattatttccctaaagatttccttatctttatagatgagtctcat
gtgacaattcctcagattagagggatgtacaatggagataggtcgagaaaagaagcatta
gtagaatacggatttagacttccttctgcctttgacaatcgtcctcttacttttgaagag
tttgaaaagaggataaatcaagttatctttgtttctgcaacaccaggaccttacgagctt
gaacattcggagcaagttgttgagcagttaatacgaccgacaggtcttatagatccagaa
gtgattgtaaaacctgtaaaagggcaagtagatgacttaataggagaaattagaaagacg
gtagacaaaggctttagagtacttgttacaactcttacgaaaaaaatggcagaggattta
acggattatctaaaagatatgggaataaaagtaaaatatttacattctgatattgagacg
attgaaagggtggaaataataagagatttaaggctgggtaaattcgatgttttaataggc
ataaatcttttaagagaagggttggatatacctgaggttgctttggtggcaatattagac
gcagataaagagggatttttgcgttcagagacttccttaatacagactataggacgtgcc
gcaagaaatgcggaaggacgagtaataatgtatgcagatactgtaacaaattctatgaag
agagcaattgatgagacgaatagaagaagaaagatacaaatggaatataacaaaaagcat
ggtataactccaaagacagtaattaagggagtaagagatgtaattgaagctactcacgta
gctgaagaagaacagaagtacagaagaaagaaagttaagacttatgaccctgaaattatt
aagtcaactatagagcaacttgaaaaagaaatgaaagaagctgcaattgagctgcagttt
gaaaaggctgcaaaattgagagatgtgatttttgaattgaagaaacagttggaggaagta
gtttga
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