Candidatus Tremblaya princeps PCIT: TPPCIT_109
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Entry
TPPCIT_109 CDS
T01563
Symbol
rpoA
Name
(GenBank) putative DNA-directed RNA polymerase, alpha subunit N-terminal domain protein
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpn
Candidatus Tremblaya princeps PCIT
Pathway
tpn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TPPCIT_109 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpn03021
]
TPPCIT_109 (rpoA)
03400 DNA repair and recombination proteins [BR:
tpn03400
]
TPPCIT_109 (rpoA)
Enzymes [BR:
tpn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TPPCIT_109 (rpoA)
Transcription machinery [BR:
tpn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TPPCIT_109 (rpoA)
DNA repair and recombination proteins [BR:
tpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TPPCIT_109 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
AEI75162
UniProt:
F7XYI6
LinkDB
All DBs
Position
complement(100022..100687)
Genome browser
AA seq
221 aa
AA seq
DB search
MLRPRVTAVVRTGLHAATIAIEPLERGMASTLGCYVRRAIVAHAPGHAASELRLRHAVGQ
LDHMQGIAEDVPGLVLNITRLVFRCHRPGPVRLCLRTGAHGKVAAGDIPMPPRCEVVNPE
ATLAHLCGGVLGLTLTLERGRGCLRPGVRHDLTPGLFYLEAVFTPVRGASYAVETTRLGC
GRVCERLVVSIETNGSASPLAVLTECVRALRAQLGLLVRSA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaggccaagggttactgcggttgtacgaactggccttcatgccgcgaccatagca
attgagccgctggagcgtggcatggctagcaccctaggttgctacgtcaggcgtgcgata
gtggcacatgccccggggcatgctgcgtcggagctacgcttgcgccatgctgtgggtcag
ctagaccacatgcagggtatagctgaggacgtgccaggcctagtgctaaacatcactcgc
ctagtcttcaggtgccacagacctggcccagtgcgcctatgtcttcgcaccggcgcccat
ggcaaggttgctgccggcgatatcccaatgccaccacgttgcgaggtcgtaaaccccgaa
gcaacgctggcgcacctttgtggcggcgtgctggggctgacgctaaccctagagcgtggc
cgcgggtgcctcaggccaggcgtacgacacgatctcacccctggcctgttctatctggag
gcagtctttacgccagtgcgcggggcgtcttacgcagtagagacgacgaggctggggtgc
ggccgcgtttgcgagaggctggtggtttccatagagaccaatggctcagcatcgccactc
gccgtccttacggagtgcgtccgcgccctaagagcgcagcttggcctgctggtgcgcagc
gcatga
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