Thalassiosira pseudonana: THAPSDRAFT_13089
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Entry
THAPSDRAFT_13089 CDS
T01078
Name
(RefSeq) ABC transporter family
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_13089
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
THAPSDRAFT_13089
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_28
AAA_29
RsgA_GTPase
AAA_16
AAA_18
ATP-synt_ab
ABC_tran_Xtn
AAA_15
nSTAND1
AAA
NACHT
MMR_HSR1
AAA_25
AAA_23
AAA_22
AAA_30
Dynamin_N
SbcC_Walker_B
T2SSE
DAP3
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
7450187
NCBI-ProteinID:
XP_002287744
JGI:
13089
UniProt:
B8BTZ0
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All DBs
Position
2:complement(651755..653467)
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AA seq
537 aa
AA seq
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GDNFEAIHLPSVSLCYEGNELLVDSTMDIIKGHRYGLLGRNGCGKSTLLSQIAAGGIPGL
PHGLRVRMVKQQQVEGRDDQTTLQALVEADEYRTALLKEQERIEDEMDRGLDMEGNAQRL
GEVAVELDVVDADNAEIRAEEILKGLSFTKQMIQSATSTLSGGWRMRLALAQAIFVPCDV
LLLDECTNHLDLYGMTWLENYLTRDRSQGSLTLICVSHDRNFLDAICTDMVVMEHKRLTY
HAGNYSQYRLKMQEKAARESQILDAAERQRSKAMEFVQKQQHQAKKSIDPNKQHHVRLAQ
KVEIEVDEPVVKLKFPNPSWPPSITEGSPVIRLEDLSFTYDVPNNSDSKFLLRHVTLSLT
KSSKIAVVGANGSGKTSLLELLSGQLNPSQGTIWRHPNIRTRNVSQYSVEELEKYSDMTV
VQYAEEKVLAGAAASDVIAKASGNVRQYLGAFGLGGSHAHKPIGMLSGGERMRLCFATVL
ADQPHVLLLDEATNHIDLETLDSLAEALRAFKGVIVMVSHNQGFLSGFCNELWVLDE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
ggtgacaactttgaagctatacatctaccatccgtgtcactttgttacgagggaaacgag
ttgcttgttgactcgactatggatataatcaaaggccatcgatacggtttgcttggacgg
aatggctgcggaaagagcaccttactaagtcaaatagcagcaggtggtattccaggattg
cctcatgggttgagagttcgtatggtgaagcagcagcaagtggagggaagagatgaccaa
actactcttcaagcattggtagaggcagatgagtatcgtactgctttactgaaagaacaa
gagcggattgaagatgaaatggacagaggattagatatggagggcaatgctcagcgactt
ggagaggtggctgttgagttggacgttgttgacgcagataatgctgagatacgagcagaa
gagattctaaaaggtctttcgtttacaaagcaaatgatacaatctgcaacaagtacgcta
tcgggtggttggagaatgagacttgcattggctcaggcgatctttgtaccatgcgacgta
ctattgcttgacgagtgcacaaaccatcttgacttgtacggcatgacttggttggagaac
tatttgacgagagacagaagccaaggatcgttgactctgatttgcgtctctcacgatcgc
aacttcttagacgcaatctgcactgacatggtcgtgatggaacacaaacggctcacctat
cacgcaggaaactattcacaataccgtctaaagatgcaagaaaaggcggctcgcgagtca
cagatactggatgcagccgaaagacaacgatccaaggcaatggagttcgttcagaaacaa
caacatcaagcgaagaagtcaatcgatcctaacaaacaacaccacgtaagacttgctcaa
aaggttgagattgaagtggatgaacctgttgtgaagctcaagtttcccaatccatcatgg
cctcctagcatcacggaaggcagtccagtcatacgattggaggacctcagtttcacatac
gacgtcccgaacaacagtgattcaaagttcttgctaagacatgtaacattaagtttgaca
aagtcaagtaagatagccgtggtgggagcgaacggtagtggcaagacaagcttattggag
cttctttctggtcagttgaatccatcgcaaggaacgatttggcgtcacccaaacattcga
accaggaacgtatcacagtactcggttgaagaactggaaaagtactctgatatgactgta
gttcagtatgcagaggagaaagtgttggcaggagcagcggcttccgacgtcattgccaag
gcctctggcaatgtaagacaatatctcggcgcgtttggattgggtggcagtcacgctcat
aaaccaattggtatgctaagtggtggagaacgaatgaggttgtgttttgccacagtactt
gcagatcagcctcacgtgcttctcctggacgaagcaaccaatcatatcgatctggagaca
ctagatagtttggctgaagctcttcgcgcgttcaaaggagttattgttatggtctcgcac
aaccaagggttcttgagtggcttctgcaatgaactttgggtacttgatgag
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