KEGG   Thalassiosira pseudonana: THAPSDRAFT_13089
Entry
THAPSDRAFT_13089  CDS       T01078                                 
Name
(RefSeq) ABC transporter family
  KO
K06158  ATP-binding cassette, subfamily F, member 3
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:tps03012]
    THAPSDRAFT_13089
Translation factors [BR:tps03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    THAPSDRAFT_13089
SSDB
Motif
Pfam: ABC_tran SMC_N AAA_21 AAA_28 AAA_29 RsgA_GTPase AAA_16 AAA_18 ATP-synt_ab ABC_tran_Xtn AAA_15 nSTAND1 AAA NACHT MMR_HSR1 AAA_25 AAA_23 AAA_22 AAA_30 Dynamin_N SbcC_Walker_B T2SSE DAP3 KAP_NTPase
Other DBs
NCBI-GeneID: 7450187
NCBI-ProteinID: XP_002287744
JGI: 13089
UniProt: B8BTZ0
LinkDB
Position
2:complement(651755..653467)
AA seq 537 aa
GDNFEAIHLPSVSLCYEGNELLVDSTMDIIKGHRYGLLGRNGCGKSTLLSQIAAGGIPGL
PHGLRVRMVKQQQVEGRDDQTTLQALVEADEYRTALLKEQERIEDEMDRGLDMEGNAQRL
GEVAVELDVVDADNAEIRAEEILKGLSFTKQMIQSATSTLSGGWRMRLALAQAIFVPCDV
LLLDECTNHLDLYGMTWLENYLTRDRSQGSLTLICVSHDRNFLDAICTDMVVMEHKRLTY
HAGNYSQYRLKMQEKAARESQILDAAERQRSKAMEFVQKQQHQAKKSIDPNKQHHVRLAQ
KVEIEVDEPVVKLKFPNPSWPPSITEGSPVIRLEDLSFTYDVPNNSDSKFLLRHVTLSLT
KSSKIAVVGANGSGKTSLLELLSGQLNPSQGTIWRHPNIRTRNVSQYSVEELEKYSDMTV
VQYAEEKVLAGAAASDVIAKASGNVRQYLGAFGLGGSHAHKPIGMLSGGERMRLCFATVL
ADQPHVLLLDEATNHIDLETLDSLAEALRAFKGVIVMVSHNQGFLSGFCNELWVLDE
NT seq 1611 nt   +upstreamnt  +downstreamnt
ggtgacaactttgaagctatacatctaccatccgtgtcactttgttacgagggaaacgag
ttgcttgttgactcgactatggatataatcaaaggccatcgatacggtttgcttggacgg
aatggctgcggaaagagcaccttactaagtcaaatagcagcaggtggtattccaggattg
cctcatgggttgagagttcgtatggtgaagcagcagcaagtggagggaagagatgaccaa
actactcttcaagcattggtagaggcagatgagtatcgtactgctttactgaaagaacaa
gagcggattgaagatgaaatggacagaggattagatatggagggcaatgctcagcgactt
ggagaggtggctgttgagttggacgttgttgacgcagataatgctgagatacgagcagaa
gagattctaaaaggtctttcgtttacaaagcaaatgatacaatctgcaacaagtacgcta
tcgggtggttggagaatgagacttgcattggctcaggcgatctttgtaccatgcgacgta
ctattgcttgacgagtgcacaaaccatcttgacttgtacggcatgacttggttggagaac
tatttgacgagagacagaagccaaggatcgttgactctgatttgcgtctctcacgatcgc
aacttcttagacgcaatctgcactgacatggtcgtgatggaacacaaacggctcacctat
cacgcaggaaactattcacaataccgtctaaagatgcaagaaaaggcggctcgcgagtca
cagatactggatgcagccgaaagacaacgatccaaggcaatggagttcgttcagaaacaa
caacatcaagcgaagaagtcaatcgatcctaacaaacaacaccacgtaagacttgctcaa
aaggttgagattgaagtggatgaacctgttgtgaagctcaagtttcccaatccatcatgg
cctcctagcatcacggaaggcagtccagtcatacgattggaggacctcagtttcacatac
gacgtcccgaacaacagtgattcaaagttcttgctaagacatgtaacattaagtttgaca
aagtcaagtaagatagccgtggtgggagcgaacggtagtggcaagacaagcttattggag
cttctttctggtcagttgaatccatcgcaaggaacgatttggcgtcacccaaacattcga
accaggaacgtatcacagtactcggttgaagaactggaaaagtactctgatatgactgta
gttcagtatgcagaggagaaagtgttggcaggagcagcggcttccgacgtcattgccaag
gcctctggcaatgtaagacaatatctcggcgcgtttggattgggtggcagtcacgctcat
aaaccaattggtatgctaagtggtggagaacgaatgaggttgtgttttgccacagtactt
gcagatcagcctcacgtgcttctcctggacgaagcaaccaatcatatcgatctggagaca
ctagatagtttggctgaagctcttcgcgcgttcaaaggagttattgttatggtctcgcac
aaccaagggttcttgagtggcttctgcaatgaactttgggtacttgatgag

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