Thalassiosira pseudonana: THAPSDRAFT_1499
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Entry
THAPSDRAFT_1499 CDS
T01078
Symbol
CTS1
Name
(RefSeq) cysteinyl-trna synthetase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
THAPSDRAFT_1499 (CTS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tps01007
]
THAPSDRAFT_1499 (CTS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tps03016
]
THAPSDRAFT_1499 (CTS1)
Enzymes [BR:
tps01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
THAPSDRAFT_1499 (CTS1)
Amino acid related enzymes [BR:
tps01007
]
Aminoacyl-tRNA synthetase
Class I (G)
THAPSDRAFT_1499 (CTS1)
Transfer RNA biogenesis [BR:
tps03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
THAPSDRAFT_1499 (CTS1)
Prokaryotic type
THAPSDRAFT_1499 (CTS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1c
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
7453402
NCBI-ProteinID:
XP_002286825
JGI:
1499
UniProt:
B8BR45
LinkDB
All DBs
Position
1:complement(1680929..1683444)
Genome browser
AA seq
807 aa
AA seq
DB search
MSLSGTGTFCQPTCCTTTPSESLRHPWFPPKASSDPIASGHLLLRNTLTGKKEPFVPMQS
RHVKWYTCGPTVYDSSHVGHARTYLSFDIMRRIMTDYFHYNVLYQINTTDIDDKIILRAR
QNELMRLLEEDPSVDFDKLVVLAKEALEEAKAKSDEKKGVIVAAIEKAGEEKNSRARTEQ
EGLLEQHLVKRKNLDKDEVNILEACGAESGKDARSDLLVAAKSVLAEKLDREKGHLITDH
SVFNAHARRYEREFMEDMAALGIREPDILTRVTEYVPKIVAFVETIISKGLAYKSNGSVY
LSLDAFQEAGHNYRKLNPAGPGGAATTAAEMAEGEGALGGVGGDSEKRNPNDFALWKASK
AGEPAWESPFGPGRPGWHIECSVVAGDILGERIDIHSGGEDLKFPHHDNELAQSEACFGC
NQWVNYFTHTGHLHIEGLKMSKSLKNFITIRQALEHNTARQLRIMFLLQGWDQPMNYSDQ
TIDDARSKETTFKSFFREVEALTRDDYLSEEVGWRMEEHDHKLADAYLTARQSVHESLLD
NFNTKEAMGALLKVINEANAYLRTANAKPSVLLLRSIATYITEILKVFGVVSGSDEFGFG
SGGSGDGNVESTDGSGSEPFIGAMVSFRESVRNEALEAAKGGDAQAAIQSILQICDGLRD
EVLPKLGVRLEDRPAGTMWNLEDPAVMMREMEEKAAKEREIQVSKLEKQLVAREKELEKV
KSSMVKPHDLFRTEEFKEWDEAGVPTTMANGEPVSGGQVKKKKKAIEKQEKAYNDLMTKS
GNNPQELLDGTQREVDYIKSKLAELSL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctccggcaccggcaccttctgccaaccaacctgctgcaccaccaccccctcc
gaatccctccgtcacccatggttccctcccaaagcctcatccgaccccatcgcctccggt
catctcctcctccgcaacacactcacggggaaaaaggaacccttcgtacccatgcaatct
cgccacgtcaaatggtacacgtgcggtcccaccgtctatgactcttctcacgtggggcat
gcacggacgtacctatcgtttgatatcatgaggaggattatgacggattatttccattac
aatgtgttgtatcagattaacactacggatattgacgataagattatcttgcgtgcacgt
cagaatgagttgatgaggttgttggaggaagatccgtctgtggattttgataagttggtg
gtattggcgaaggaggctttggaggaggcaaaggcaaagagtgatgagaagaagggagtg
attgtagcggctattgagaaagcgggagaggagaagaattcaagggcaaggacggagcag
gaggggttgttggaacagcatttggtcaagaggaagaatttggataaggatgaggtcaac
attttagaggcgtgtggcgccgagagtggaaaagatgcaagatccgatctattggtggct
gccaagtccgttttggctgaaaagttggacagggagaagggacacctcatcaccgatcac
tccgtgttcaatgcccatgctcgtaggtacgaacgtgaattcatggaggatatggctgcc
ctcggtatccgtgagcctgacatcttgacccgtgttacggagtatgtgcccaaaatcgtt
gcctttgtggaaaccatcatttccaaagggttggcatacaagagtaatggatcagtgtac
cttagtcttgatgcctttcaggaagcaggacacaactatcgtaagctcaaccctgcaggt
ccggggggagcagccaccactgccgccgagatggcagagggagagggagcacttggtggt
gttggaggggacagtgagaagcgtaatcctaatgactttgcgctttggaaagcgagtaag
gcgggtgagcctgcttgggagtcgccgtttggaccgggaagacctggatggcatattgag
tgttcggttgttgcgggagatattcttggtgaacggattgatatccattctggaggagaa
gatctcaagttccctcaccacgacaatgaactggctcagtcagaggcgtgcttcggatgc
aaccaatgggtgaactacttcacccacactggccacttgcacattgaaggactcaaaatg
tccaagtcgctcaaaaatttcatcaccattcgccaggcattggaacacaacactgctcgt
cagctccgtatcatgttcttgttgcaggggtgggatcaacccatgaactattccgatcaa
actattgacgatgcacgaagcaaggagactaccttcaaaagtttctttcgtgaggttgag
gcacttactcgtgatgattacttgagtgaggaggtgggatggagaatggaggagcacgat
cacaaattggccgatgcttacttgacagctcgacagtcagtgcatgagagtttgttggat
aacttcaatacgaaggaggctatgggggcgttgctcaaggttatcaatgaggcgaatgca
tacttgagaacggcaaatgcaaagccgtcggtgctcctgctgcggtctattgcaacctac
atcactgagattctcaaggtgtttggtgtcgttagcggttcagatgaatttggattcgga
agcggaggcagcggtgacggtaacgtagaatctaccgatggcagtggctccgaacctttc
atcggagccatggtgtcattccgagaaagtgttcgtaatgaagcattagaagcagccaaa
ggcggagacgctcaagctgcaatccaatcaattcttcagatttgcgacggtctacgtgat
gaggtgcttcctaagttgggtgttcgcctcgaggatcgtcctgcaggcactatgtggaat
ctcgaggatcctgccgtcatgatgcgggaaatggaggagaaggcagcaaaggagcgtgag
attcaggtttcaaagttggagaaacaacttgttgcgcgtgagaaagagttagagaaggtc
aagagtagcatggtaaagccccatgatttgttccgaacggaagagtttaaggagtgggac
gaggccggagtgccaaccacaatggcgaacggagagcccgtgagtggggggcaagtgaaa
aagaagaaaaaggcgatcgagaagcaagagaaggcgtacaacgatttgatgacgaaaagt
ggcaacaatcctcaagagttgctagatggtacgcagagagaagttgattacattaaatca
aagctggcagagctttcgctgtaa
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