Thalassiosira pseudonana: THAPSDRAFT_22635
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Entry
THAPSDRAFT_22635 CDS
T01078
Name
(RefSeq) SAR DNA-binding protein
KO
K14565
nucleolar protein 58
Organism
tps
Thalassiosira pseudonana
Pathway
tps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THAPSDRAFT_22635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_22635
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
THAPSDRAFT_22635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
NOP5NT
Motif
Other DBs
NCBI-GeneID:
7451779
NCBI-ProteinID:
XP_002290153
JGI:
22635
UniProt:
B8C288
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All DBs
Position
5:593392..602167
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AA seq
438 aa
AA seq
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MHLLFETPAGYSLFKITDDKKLSKTDDDDLHDKFFADATKAKKYVNLVHFEPFSDTADAV
TAAAACIDGKVPKSLKSFLKKQLKKSGKGDSLAIADKSLVAGIKEAVPNLGCTLACDSKT
HELFRGIRCYLDDLMEDGGGSDADNGPAVSESDLNAMRLGLSHSLSRYKLKFSADKVDTM
VIQAIGLLDELDKEINTYAMRVKEWYGWHFPELQGIVNDNAQYSKLVLKCGYRSSFREND
LSQILEEESIEAAVKEAAEVSMGTEISELDVINIQALAEQVLSMTEYRIQLFDYLKNRMN
AIAPNLTILLGELVGARLISHSGSLMNLAKQPASTVQILGAEKALFRALKTKHDTPKYGL
IYHASLVGQAAPKHKGKISRVLAAKAALATRVDALSDETSEHPDTTIGYEGRAKVEARLR
QLEGGDGTLSKWKTCRRS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccttttcgaaacacccgcagggtactccctgttcaagattactgatgacaag
aagttatccaaaaccgacgacgacgacctccacgacaaattctttgccgacgcaaccaag
gccaagaaatacgtaaacctcgtccactttgaacccttctcggacactgctgatgcagtc
acagccgcggcagcttgtatcgacgggaaggtacccaagagtctcaagtcttttctaaag
aagcagctcaagaagagtggaaagggggatagtcttgccattgcagataagagtttggtt
gcggggatcaaggaagcagtgcccaacttggggtgtacattggcttgtgattccaagacc
catgagttattccgtggcattcgttgttatttggatgatctgatggaggatggtggtggg
agtgatgccgataatggcccagctgtttcggaatcggacttgaatgccatgagattggga
ttgagtcattctctttcaaggtataagttgaagttttctgcagataaggtggatacgatg
gttattcaggctattggcttgttggatgaattggataaggagattaacacgtatgctatg
cgtgtgaaggaatggtacggatggcactttccagagcttcagggtatcgtgaacgacaac
gctcagtactcaaaacttgtactcaaatgtggataccgatccagcttcagagagaatgat
ctttctcaaatactggaggaggaatcaattgaggctgcagtaaaggaagcagcagaggta
tctatgggcactgaaatctctgagctcgatgtgatcaatatccaggctttggccgaacag
gtgttgtcgatgactgagtatcgtattcagctctttgactacctgaaaaaccgtatgaat
gcgatcgctcccaatcttactatccttttgggagagttggttggagctcgtctcatttct
cactctggatccttgatgaacttggcaaagcagcctgcttccacagtccagatccttggt
gccgagaaggctctctttcgtgcactaaagaccaagcacgatactcccaagtacggtctc
atctaccacgcatcattggttggacaggcagcacccaaacacaagggtaagatcagtcgc
gtccttgcagctaaggcagctcttgctacccgtgttgatgcattgtcggatgagacatct
gagcatcctgatacaaccattgggtacgagggacgagcaaaggttgaggccaggttgcgt
caattggaaggaggagatggaactctatccaagtggaagacttgtcgaagaagttga
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