Thalassiosira pseudonana: THAPSDRAFT_25284
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Entry
THAPSDRAFT_25284 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
MRP-S26
Motif
Other DBs
NCBI-GeneID:
7442133
NCBI-ProteinID:
XP_002294397
JGI:
25284
UniProt:
B8CE94
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All DBs
Position
17:434988..438319
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AA seq
1015 aa
AA seq
DB search
MARFSLSPPASSIHRQPQSSSPSTSTTPDFKWRYPPQDNFSTRLPVSTNDDGDTSSDDDE
STTPTVDYSDSSSTSSEEEEPPHPLGFESRYGTTRFGPSLSSCYARTGRGPPRDIFNVED
EGAWNALVSIDQFKRGGVSASSGVQSFPPIGGYFNQRGSGVSTKVLLDGAMVYARSRDEE
KEMQELLLGMDRIAHLVEVASALNQHAAANDDVAASSTLSPFTVKSPSYPSQPAPVGTPS
FVSHPPTSTSKLLQLAQACEHHQTHTLPSQMSRLEQESNQSYKDSCHGLLMLLNADASVV
AKAESSIAKRLEEREQEEEELRLQRIKREEELERQRQREEQLELERREKAEIQSKEEELK
QQQRAEQFRKAEEEAELEAKSKNAHVDRASSLISNLDTVRTSLSEFDKSKTVGKRRLQFK
KVVNGKINTLSHEDRKIMEVAGVVVDAIGNAEREDAESVSAGGEGVMGMGKKYLLDLLAS
NLIVRVQADGFNGTRGDGFPLAAMFASVSTHCDELGPLLEAHLYTVCPTAIPTLSMTTAE
GDENALMESLGMIKDKSGEFESFDKFLHRTEGLISIMADIMSSLPSSHTLLGGHLGAITW
LERFMDILPASPTSPLPLLTAPVLVAFLTGAGHMLANKFPTQFQPIFEIIKNDIMDRLDD
SPVGVPSATRLKKVIEGGWNGLKKDLPPGAVASLYDGTEGSGTVELVLPSASAGVGGGAT
QSTGFGQPQQANASPFAGGGGSMGGSGTSNNPFSSTSSTNTSFASFGASSSSASQIQASN
PFGQQPVSSAPSPFGGGFAPSSSQSSNPFGVAPANTASPFGAPPAAPTPFGQQPAPSSFG
GSGSGTGIGIFGKQQSAPAPSPFGQQPAASAPSPFGGGSSSEGGFGNQASSFGGNQSSGN
SRKDSRPPCKFFASGKCRNGASCRFSHEGQAQNYSGGNTDASFGSTFGGGSNNGGSFAIS
NPSPFSTNSGGAFGSSNSSSFGSSNPFGGGNSGGFGSSPFSSNTSNNNPFGAPRR
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggcacggttcagcctctctccacccgcctcctccattcatcgccagccgcagtcctct
tctccgtccacatcaaccacacctgatttcaaatggagatatccgccgcaagacaacttc
tcgacacgccttcctgtgtcaaccaacgacgatggcgatacgtcctcggatgatgacgaa
tccacaacacccaccgttgactactcagattcatcctccacctcctctgaagaagaagag
ccacctcatccacttggatttgaatctcgctacggcaccactcgatttggaccgtctctc
tcctcgtgttacgcccgtacaggcagaggtccaccgagggacatcttcaacgtggaagat
gaaggggcgtggaacgcactcgtatccattgatcaattcaaacgagggggtgttagcgcg
agcagcggtgtgcagtcgtttcctcccatcgggggctatttcaatcaacgggggagtggt
gtttctaccaaggtcttgttggacggtgccatggtttatgcaagaagtagggatgaagag
aaggagatgcaagagttgctattggggatggatcggattgcacatctggtcgaggtggcg
agtgctttgaatcaacatgctgctgcaaatgatgatgtagctgcttcttcgactttgtcg
ccttttactgtcaagtcgccatcgtatccgtctcaaccggcacccgtcggtacgccctcc
ttcgtgtctcacccaccaacgagcacgtccaagctactgcaactagcccaagcatgtgaa
caccatcaaactcacacgttaccatcgcaaatgtcacgactggaacaagaatccaatcaa
tcctacaaagactcctgtcacgggctgttaatgctcttgaatgccgatgcgtccgtagtc
gcgaaagcagagagtagtatcgccaagcgattggaggaacgtgaacaagaagaggaagaa
ttacgattgcaacgcatcaagagggaggaggaacttgagagacaacgccagcgcgaagaa
cagctcgagttggaacgaagagaaaaagccgagatacagtccaaagaggaagaactgaaa
caacaacaacgtgctgaacagtttagaaaggcggaagaagaggctgaattggaagccaag
tctaagaacgcccatgttgatagagcctccagtctcatctccaatcttgacacggttcgt
acttctttgagtgaatttgacaagtcaaagacagtagggaagcgtcgtctccaattcaaa
aaggttgtcaatggaaagatcaacacgttaagtcacgaagatcgtaagattatggaagtg
gcgggggtagtggtggatgctattgggaatgcagagagagaggatgcagagagtgtgagt
gcgggtggggagggagttatggggatggggaagaagtatctgttggacttattggcgagt
aatttgattgtgagggtgcaggctgatggttttaatggaacacgtggtgatggcttccca
ctcgcagccatgtttgcttcggtatccacacactgtgatgagttaggaccattactggag
gctcatctctacactgtttgtccgacggctattccaacattgtcaatgacaactgctgag
ggggatgagaatgcgttgatggaaagtctgggaatgatcaaggataagagtggcgagttt
gagagcttcgataagtttcttcatcgtactgagggtctcatatccatcatggctgacatc
atgtcatcacttccatccagtcatacgcttcttggagggcatctgggagcaattacttgg
cttgaacgtttcatggatatcttgcctgcatctcctacttctccactcccgctattaaca
gctccggtactcgtggcgtttctaaccggagcagggcacatgcttgcaaataagtttcct
actcagttccaacccatctttgaaattattaagaatgatatcatggataggttggatgac
agtccagtgggagtgcctagtgctacgaggttgaagaaagttatcgaaggaggttggaat
gggttgaaaaaagacttgcctcctggagcagtggcttctctgtatgatggaacggaaggg
agtgggacagtagagttggtattgccttctgcaagtgctggggtaggcggaggagcaaca
caatctacaggatttggtcagcctcaacaggcgaacgcctcaccatttgcaggtggcgga
ggttcaatggggggtagtggcacatccaacaatccattttcgtctacgtcaagtaccaac
acttcttttgcatcctttggtgcttcgtcttcttccgcttctcaaatccaagcatccaac
ccatttggacagcagcctgtatcatctgcaccttctccttttggaggagggtttgctccg
tcttcatctcagtcatcaaatccctttggtgttgctccggctaacactgcctcaccattt
ggagctccaccggcagcaccaactcctttcggacagcaacctgcaccttcttcgtttggg
ggatcaggttcgggaacagggattggaatattcgggaaacagcaatctgcacctgctccc
tcaccttttggtcaacagcctgcagcatccgcaccgagtccttttggtggtggatcaagc
tcagaaggaggatttgggaatcaagccagttcatttggaggcaatcaatcgtctgggaac
agtagaaaggattctcgtcctccttgcaaattctttgccagtggaaagtgtaggaacggt
gctagctgtcgcttttctcatgaaggacaagcacaaaactactctggaggcaacaccgat
gcgagttttgggtcgacgtttggaggtggaagcaacaacggaggaagcttcgctatttcc
aatcctagtcctttcagtaccaacagcggaggagcttttggaagtagcaacagcagtagc
ttcggcagttctaatccgtttggtggaggaaacagtggagggtttggatcgtctcctttc
tcttcaaacacatcaaacaacaacccatttggagctccacggcgatga
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