Thalassiosira pseudonana: THAPSDRAFT_264722
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Entry
THAPSDRAFT_264722 CDS
T01078
Name
(RefSeq) ras superfamily gtp-binding protein
KO
K07897
Ras-related protein Rab-7A
Organism
tps
Thalassiosira pseudonana
Pathway
tps04144
Endocytosis
tps04145
Phagosome
tps04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
THAPSDRAFT_264722
04145 Phagosome
THAPSDRAFT_264722
04148 Efferocytosis
THAPSDRAFT_264722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_264722
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_264722
04031 GTP-binding proteins [BR:
tps04031
]
THAPSDRAFT_264722
Membrane trafficking [BR:
tps04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
THAPSDRAFT_264722
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THAPSDRAFT_264722
Exosomal proteins of other body fluids (saliva and urine)
THAPSDRAFT_264722
Exosomal proteins of colorectal cancer cells
THAPSDRAFT_264722
Exosomal proteins of bladder cancer cells
THAPSDRAFT_264722
GTP-binding proteins [BR:
tps04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
THAPSDRAFT_264722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
SRPRB
cobW
AAA_16
AAA_22
NACHT
nSTAND3
AAA_24
Motif
Other DBs
NCBI-GeneID:
7443393
NCBI-ProteinID:
XP_002294628
JGI:
264722
UniProt:
B8CEZ1
LinkDB
All DBs
Position
20:564845..566474
Genome browser
AA seq
195 aa
AA seq
DB search
LKCIILGSAGAGKTSLLRRYVHGSFEDHHLTSIASQQVVTTITVVESHCQVQLWDTRGKE
QLAPPEWYALFRNIDACMLVYDATSSMSFLQLMQWHEEWMKRLRYWEMEDSVPFIVVANK
IDLLYGENNGAESQLPANRSMILLWCQRNGIPHVEASALDGRGVDEAMQQLVKMGVEELG
KREMAVVMKKEYEDM
NT seq
586 nt
NT seq
+upstream
nt +downstream
nt
ctcaagtgtataatattgggaagtgcaggggcgggtaaaacgagcttattgcgtcgttat
gtgcacggttcatttgaagatcaccacctaacatcaatagcgtcacaacaggtggtgaca
acaataacagtggtggagtcacactgccaagtccagttatgggacactcgtgggaaagag
caacttgctcctcctgaatggtacgccctctttcgcaacattgatgcctgtatgctagta
tacgatgctacctccagcatgtcatttctacaacttatgcaatggcatgaagagtggatg
aaacgattgaggtactgggagatggaggattccgtgccgttcatcgtggtggcaaacaag
attgacttattgtatggggagaataatggggccgagagtcaactgccggcgaataggtcc
atgatattactttggtgtcagagaaatggtattcctcacgtggaggcaagtgccctagac
gggcgaggagtagatgaggcaatgcaacaacttgtcaagatgggggtggaggagttgggg
aaacgagagatggctgtcgttatgaagaaggaatatgaggacatga
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integrated database retrieval system
