Thalassiosira pseudonana: THAPSDRAFT_31266
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Entry
THAPSDRAFT_31266 CDS
T01078
Name
(RefSeq) isopentenyl-dephosphate delta-isomerase-like protein
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00900
Terpenoid backbone biosynthesis
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Module
tps_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
tps_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
tps_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
THAPSDRAFT_31266
Enzymes [BR:
tps01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
THAPSDRAFT_31266
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Gene cluster
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Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
7449793
NCBI-ProteinID:
XP_002286536
JGI:
31266
UniProt:
B8BSS3
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Position
1:complement(133217..134061)
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AA seq
254 aa
AA seq
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MGRKWDGSAMSQTEFMERDTVLVVNDDDVVIGSESKRSAHEFTPSQPRGVLHRAFSVFLF
DESTSELLLQKRASSKITFPNVWTNTCCSHPLHGMDVNEVDGPEDVMDGSVRGVKAAAIR
KLNHELGIPFGELAVEDFKFLTRVHYWAADSVTHGTKRCVVPWGENEIDYILFAAVSTKS
TLTINPHPDEVDDVRWVKPFELIEMFDDSSLLFSPWFRIIAYRWMIGDKGWWNDLERTMT
TYDFCDFESLHRFD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaagtgggatggatctgcaatgtcgcagactgaattcatggaacgcgacaca
gttcttgtcgtgaatgacgacgatgttgtcattggctctgaatccaaacgttccgcgcat
gagttcacacccagtcaaccacggggtgtacttcacagagcctttagcgtctttttgttt
gatgaatcaacttcagaacttttgttgcaaaagagagctagttcgaagattactttcccc
aatgtatggacgaacacatgctgtagtcatccactacatgggatggatgtcaacgaggtc
gatggaccggaagatgtgatggatgggagtgttaggggagtaaaggctgcggcgattagg
aagttgaatcatgagttgggcattccatttggggagcttgcagtggaagacttcaagttc
ctgacgcgagtgcattattgggcagcagattctgtgactcatgggacgaagaggtgtgtt
gttccatggggagagaatgagattgactacattctgttcgctgcagtgtcgactaaaagc
acactaaccataaatcctcatcccgatgaagtagatgatgttcgttgggttaagccgttt
gaactaattgagatgtttgatgattcatcccttttgttctctccttggtttcgtatcatt
gcttatcgctggatgattggagacaagggatggtggaatgatttggaacgtacaatgacg
acttatgacttctgtgactttgagagtcttcatcggttcgac
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