Thalassiosira pseudonana: THAPSDRAFT_31609
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Entry
THAPSDRAFT_31609 CDS
T01078
Name
(RefSeq) mcm5-like protein
KO
K02209
DNA replication licensing factor MCM5 [EC:
5.6.2.3
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THAPSDRAFT_31609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tps03032
]
THAPSDRAFT_31609
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_31609
Enzymes [BR:
tps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
THAPSDRAFT_31609
DNA replication proteins [BR:
tps03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
THAPSDRAFT_31609
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
THAPSDRAFT_31609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
MCM_N
Mg_chelatase
AAA_3
AAA_5
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
7449050
NCBI-ProteinID:
XP_002286387
JGI:
31609
UniProt:
B8BRW4
LinkDB
All DBs
Position
1:2379491..2382282
Genome browser
AA seq
682 aa
AA seq
DB search
MGGGGDWNPNKSYIHVDLAHVGEYDAALLGQLLNRPSEALPVLEMAAADALRTLLYAQQL
FGGNSIQIMLRGNLTPTPLRSIQSHHMNSLLKCPGIIISCARVRPRAMALRIRCTKCMDV
RTVFGNSSVSGTNGGVGSRALGLGSSSPFAGFSLPTRCLGPNPQECGPSPYAVLPDDCLF
VDQQTLKLQEAPEMVPTGEMPRSVLVAVERGLVDKAPPGTRVTVLAIASLFNTGGAEGGS
GGVKTTYLRVVGMERESSTADSARFSPAEEEAFRQLSRRPDIYNILYRSIAPSISGSYTV
DLKKAILCLLFGGSRKRLPDGMKLRGDINVLLLGDPSTAKSQFLKFATRVAPVGVYTSGK
GSSAAGLTASVVRDARGEFYLEGGAMVLADGGIVAIDEFDKMRPADRVAIHEAMEQQTIS
IAKAGITTVLNSRSSVLAAANPVFGRYDDLKSASENIDLMSTILSRFDLIFLVRDVRDET
RDRMICRHVMGVHIGNSGGEGDGAGELDVPTMKKYIQYCKAKCAPRLSDEAGDILASSYV
KIRDDVRKRTMDSGQAQAAIPITVRQLEALVRVSESLAKMRLDSQVQSEDIAEALRLFKV
STMTANSTDQTNAMPSQEELMRAETFLRSRLAIGAVLNKQRIVEEAAAQGYNAMTIARAM
SIMVARGEVQERNQSRMVKRVR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggtggagattggaatcccaacaaatcttacattcacgtggatttggcacat
gtgggggaatacgatgctgcgttgttgggacagttgctgaataggcccagtgaggcgttg
cctgtgttggagatggctgctgcggatgcattgaggacgttgttgtacgctcaacaattg
tttggggggaactctattcaaatcatgctacgtggaaatctcactcctacgccacttcgt
tccatccaatctcatcacatgaacagtctgttgaagtgtccaggaatcattatctcatgt
gcacgagtgaggcctagggcaatggcattacgcattcggtgtacgaagtgcatggatgta
cgaacagtctttggcaattccagtgtgagtggtaccaacgggggtgttggctctagagca
ttgggacttggctcttcttctccttttgctggattttcattgcccactcgttgtttgggg
ccgaatccacaagagtgtggtccgtctccgtatgcggtgcttccagatgattgcttgttt
gtggatcagcagactttgaagttgcaggaggccccggagatggttcccacgggagaaatg
cctaggagtgtattggtggctgtggagagagggttggtcgataaggcacctcccggtacg
agggtgactgtgttggctattgccagtttgttcaatactggaggagcagagggcggtagt
ggaggagtaaagacgacgtatcttcgtgttgtgggtatggaaagagagtcgtctactgca
gacagtgctcgtttctcgcctgctgaggaggaagcatttcgtcagttgtctcgtcgccca
gacatttacaacattttgtatagatccattgcaccctccatttccggatcgtacactgtg
gatcttaagaaagcaatcctgtgtctcttgtttggtggatcacgcaaacgtcttcccgat
ggaatgaagctccgtggagatatcaacgtgttgttgctcggagatccttctactgccaag
tctcagtttctaaagtttgccacgagggtggcacccgtgggagtgtatacgagtggaaag
ggaagttctgctgctggtttaactgccagtgttgtgagggatgcacgtggagagttttac
ttggagggaggagcaatggtgttggccgatggtggcattgtggctattgatgagtttgac
aaaatgagacctgcagatcgtgttgcgattcacgaagccatggaacagcaaaccatttct
attgcaaaagctggtatcaccactgtgctcaacagtcgaagttctgttcttgctgctgct
aaccctgtctttgggcgttacgatgacctcaaaagtgcgtcagagaatatcgatttgatg
agtaccattttgtcccgttttgacctgatctttttagtgagagatgttagagacgagacc
agggataggatgatttgcagacatgttatgggagtgcacattggaaactcaggaggagaa
ggtgatggtgctggagaattggatgttcctacgatgaaaaagtatattcagtactgcaaa
gcaaaatgtgcgccacgtctcagtgacgaagctggcgatatcttggcaagctcatacgtc
aagattagggacgatgttcgtaaacgtaccatggattctggacaagctcaagcagcaatt
cccattacagttcgtcagcttgaagcccttgttcgtgtatctgagagtcttgccaaaatg
cgtcttgattcacaggttcaaagtgaagacattgctgaggcattgcgactatttaaagtt
tcgacaatgacggcaaactcaacagatcaaacaaatgcgatgccttcgcaggaagagttg
atgcgtgccgaaacgtttcttcgttcacgcttagccattggtgcggtcttgaacaaacaa
cgaattgtggaagaagcagcagctcagggttacaatgcaatgacgattgcgagggcaatg
tccatcatggttgcacggggagaggtacaagaaagaaatcaaagtcgcatggtgaagaga
gtgaggtag
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