Tardiphaga robiniae: HB776_27190
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Entry
HB776_27190 CDS
T06738
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
trb
Tardiphaga robiniae
Brite
KEGG Orthology (KO) [BR:
trb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trb03019
]
HB776_27190 (hrpB)
Enzymes [BR:
trb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HB776_27190 (hrpB)
Messenger RNA biogenesis [BR:
trb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HB776_27190 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
ResIII
HA2_C
Flavi_DEAD
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QND74476
UniProt:
A0A7G6U644
LinkDB
All DBs
Position
5701157..5703631
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AA seq
824 aa
AA seq
DB search
MTRTFDTSLPIDAVLDELSGALDAGNAAVLVAPPGAGKTTRVPLALLDAPWLKGKKIIML
EPRRIAARASAERMAKTLGERVGETVGYRVRFGSKISRNTRIEVVTEGIFSRQILDDPEL
RNIGAVLFDEFHERSLDADMGLALARDAQTGLREDLRILVMSATIDGVRIAKLLGDAPVI
ASEGRAYPVETRYLGRKPDIQLERQMADAIATALRADPGSVLAFLPGAAEIRRTQNFLAE
RVQDASIEIVPLFGALDAGVQDRAIQPAPKGQRKVVLATSIAETSLTIEGVRIVVDSGVA
RVPRYEPDIGLTRLETVRASRAAVDQRRGRAGRTEPGICYRLWDEPQTASLPAYTQPEIL
SADLSTLVLDLAQWGVSDPAQLTFLDPPPAPALKEARGLLGELGALDGDGRITEEGHALR
ALALPPRLARMIVDSARFGYGEEAAEIAAVLTERGLGGDSVDLDVRLDQFRRDRSQRAGS
ARQLAERWASQVEKSSSAQENEELSTGTMLAFAFPDRVAKNRGNGSFVLANGRGASIEQS
AALARVPYIAVVELTGTAANGRILLAAPIAQADIETRFVDQIENTDDVSFDRASMSLRGR
RKRVLHAITLSEAPFTLKPSEDTARVFADGLVAAGIDRLPWSKALQQWRGRVMFLRVSEG
DAWPDLSDTALAAARETWLMPALFDKISSKDFSPGDLSDAVMGLLPWDLRARLDKEAPTH
FEAPTGTVLAIDYEAEQGPTIAVRLQELFGLNTHPSVAKGKVPLVLELLSPAQRPVQVTR
DLPGFWRGSYLDVRSDLRGRYPRHPWPEDPANALPTRRVKPRGT
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
ttgacccgaaccttcgatacatccctgcccatcgatgctgtgctcgatgagctgtcaggc
gcgctggacgccggcaacgccgcggtgctggtggcgccgccgggcgccggcaagaccacg
cgcgtgccgctggctttgctcgatgcgccgtggctgaagggcaaaaagatcatcatgctg
gagccgcggcgcatcgcagcccgcgccagcgccgagcgtatggcgaaaacgctgggcgag
cgcgtcggcgagaccgtcggctatcgcgtccgcttcggctccaagatctcgcgcaacacc
cggatcgaagtagtcaccgaaggcatcttctcgcggcagatcctcgacgatcccgagttg
aggaatatcggcgcggtgctgttcgacgaatttcacgaacgctcgctggatgccgatatg
ggactcgcgctggcgcgcgatgcgcagaccggattgcgtgaggacctacgcatcctggtg
atgtcggcgaccatcgacggtgtgcgcatcgcgaagctgcttggcgatgcaccggtcatc
gccagcgaggggcgcgcttatccggtggagacacgctatcttggccgcaagccagatatc
cagctcgagcggcagatggccgacgccatcgcgaccgccttgcgtgccgatcccggctcg
gtgttggcgttcctgccgggcgctgcagagatccgccgcacgcagaattttctcgccgag
cgcgtacaggatgcatccatcgagatcgtccctttattcggtgcactcgatgccggcgtg
caggaccgtgccatccagcccgcgcccaaggggcagcgcaaggtggtgctggcgacctcg
attgccgagacctcgctgaccatcgaaggcgtgcgcatcgtggtggattccggcgtcgcg
cgcgtgccgcgctatgagccggacatcggactgacgcggctggaaaccgtgcgtgcctcg
cgcgccgccgtcgatcagcgccgcggccgcgccggccggaccgagcccggcatctgctac
cggctatgggacgagccgcagaccgcctcattgccggcctacacacagccggaaattctc
agcgcggatctgtccacgctggtgctcgatctcgcgcaatggggcgtcagcgatcccgcg
caactgaccttcctcgatccgccgcccgcgccggcgctgaaggaagcgcgcggcctgctc
ggcgagctcggcgcgctcgatggtgatggccgtattaccgaggaaggccatgcgctgcgc
gcgctggcgctcccgccgcggctggcgcgcatgatcgtggattcggcgcgcttcggctat
ggcgaggaggctgccgagatcgctgcggtccttactgaacgtggccttggtggcgacagc
gtcgatctcgatgtcagactcgatcagttccgccgcgatcgctcgcagcgcgctggcagc
gcccggcagctcgcggagcgctgggcgtcgcaggttgaaaaatcctcttctgcccaagag
aacgaggagctttccaccggcaccatgcttgctttcgctttcccggaccgtgtggccaag
aaccgcggtaatggcagtttcgtgctggccaatggtcgaggggcgtcgatcgaacaaagc
gccgcgcttgcgcgggtgccttacatcgccgtcgtcgaactcaccggaaccgccgccaat
ggccgtatcctgctggcagcgccgatcgcgcaggccgatatcgagacgcgcttcgtcgat
cagatcgagaataccgacgatgtcagtttcgatcgggcatcgatgtcgctgcgcggccgc
cgcaagcgtgtgctgcatgcgattacgttgtcggaagcgccgttcacgctgaagccatcc
gaagacaccgcgcgcgttttcgccgacggtctggttgccgcgggcatcgaccgcttgcca
tggtcgaaggcgctgcagcagtggcgggggcgcgtgatgttcctgcgcgtgtcggaaggc
gacgcctggcccgatctgtccgacactgcgctcgccgcggctcgcgagacctggctgatg
ccggcgctgttcgacaagatctcctcgaaggatttttcgcccggcgatctgtcagatgcc
gtgatgggcctgctgccctgggatctgcgcgcgcggctcgacaaggaagcgccaacgcat
ttcgaggcgccgacggggaccgtgctggcgatcgattatgaagccgagcaggggccgacc
attgccgtccgtctgcaggaattgttcgggctgaacacccatccctcggtcgccaagggc
aaggtgccactggtgctggaattgctgtcgccggcgcagcgcccggtgcaggtgacgcgc
gatctgccgggcttctggcgcggcagctacctcgatgtgcgctctgacctgcgcggccgc
tatccgcgccatccctggccggaagatcccgccaatgcgctgccgacgcgccgcgtgaag
ccgcgcgggacgtga
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