Trichoderma reesei QM6a: TRIREDRAFT_25225
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Entry
TRIREDRAFT_25225 CDS
T02991
Name
(RefSeq) replication factor C, subunit 1-like protein
KO
K10754
replication factor C subunit 1
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03030
DNA replication
tre03410
Base excision repair
tre03420
Nucleotide excision repair
tre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRIREDRAFT_25225
03410 Base excision repair
TRIREDRAFT_25225
03420 Nucleotide excision repair
TRIREDRAFT_25225
03430 Mismatch repair
TRIREDRAFT_25225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tre03032
]
TRIREDRAFT_25225
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_25225
DNA replication proteins [BR:
tre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TRIREDRAFT_25225
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TRIREDRAFT_25225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_18
DNA_pol3_delta
AAA_16
BRCT_2
AAA_30
AAA_14
AAA_33
RuvB_N
NTPase_1
AAA_28
Motif
Other DBs
NCBI-GeneID:
18484320
NCBI-ProteinID:
XP_006961012
JGI:
Trire2_25225
UniProt:
G0R7G1
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
DIRSFFAPKGGAPPKPAAAKPEPPAKGKRGKGRKVIEDSDDDEVVEYYILCNEYCSLPWN
VLTPIRETEPKGVAISADDYFASSKDPKTAKASQTPKKGDKKTIIEADVPVRSSPRPKKT
MAKPAAPEDEDEDEDVASRPKRARNSYKAAPAPTHDDDDDDVYMDDGDEDADDIFAADAK
GRNKRKNDDYEEEDSEDEVIPQPRRIASRGRPAASAKKAEEKVKTTPATKKRKSPEQESD
EEEELPRKKPAAASKPRAPRAKKADQPEDEAIQNILDSVATVRAPTPPPKDGKPFDWRKS
ASGGNASAQPSQPAGELPEGEEECLSGLTFVFTGVLQTIGREEAQALVKRYGGKVTGQPS
SKTSFVVLGDDAGPSKLAKIRSNGIKTIDEHGLFDLIRKLPAFGGTGKGAQKAQEKKKAE
EEKVRQQVAEMEAEEKAQRREAEKEAKRLAAARGQPSSTPVKPAAAPTQLLTSKYAPTQL
NQICGNKAQVEKIQRWLHNWPKSKKYNFQKRGADGMGGERAIIISGPPGIGKTTAAHLAA
KLEGYDVLESNASDTRSKKLVEAGLSDVMNNTSLLGFFAGDGKSVHSEKKKIVLIMDEVD
GMSAGDRGGVGALAKFCRKTEVPLILICNERRLPKMKPFDHVAFDIRFNRPTVDQVRSRI
MTICHREGLKMPPPVVDALIEGSNKDIRQIINMIATAKLDQSTMNFDQTKSMSKAWEKHV
VLKPWDICQKMLGGGLFAPASKATLNDKIELYFNDHEFSYLMIQENYLQTKPMALSGSGY
RGREATLKALELFDQAAESISDGDLVDRMIHGPQQQWSLMPTHAVFSTVRPASFVAGQLL
GSNFTSWLGNNSKAGKLGRYIREIHSHMRLKSSGDHNEVRQEYLPVLWSQTVDRLQKEGT
EAVEEVIDLMDSYYLTREDFDAIQELGVGPMDEERVKIETKTKAAFTRTYNSMNHPLPFI
KASNVFAPKKQTKEMPDLEEAIEEEDDAELLEAPDVDEDDEIDLKKDKYIKQPKVKKPAK
KASKTSTG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
gatattcgatcattcttcgcgccaaagggtggtgcacccccgaagcctgcggctgcaaag
ccagaaccgccggccaaaggaaagcgaggaaaagggcgcaaggtcatcgaagatagcgac
gatgacgaggtggtagagtactatatactgtgcaatgagtattgctcccttccatggaat
gtgttaaccccaattagggagacggaaccaaaaggcgtagcaatatctgccgacgactac
tttgcctcctccaaagatcccaagaccgctaaagcatctcaaactcccaagaagggcgac
aagaagaccatcatcgaggccgatgttcctgtcaggtccagtcctcggcccaagaagact
atggcaaagccggctgcaccggaggatgaggatgaggatgaagatgtagcttctcgaccg
aagagggccagaaattcatacaaggccgctcccgctcccacccacgacgatgacgacgat
gacgtttatatggacgacggtgacgaggacgcggacgatatcttcgccgctgacgccaaa
ggccgaaataagcgcaagaacgacgattacgaggaggaagactccgaagacgaggtcatt
ccacaacccagacggatcgcttcacggggacggcctgccgcttctgccaagaaagctgaa
gaaaaggtaaagacgacgccggcaaccaagaagagaaagtcgcctgaacaggaatccgat
gaggaggaagagctgccaaggaagaaacctgcggcagcaagcaaaccgcgcgcgccaagg
gccaagaaagcagaccaacccgaggacgaagccatccagaacatcctagacagcgtggct
actgtacgagcgccaacacctcctcccaaggatggcaaaccctttgattggaggaaatca
gcctcaggcggtaatgcctcggcgcaaccttcgcagccagccggcgaactcccagagggc
gaggaagagtgtctcagtggattgacctttgttttcactggcgtgctgcaaacgattggc
cgcgaggaagctcaggccctagtcaagcgatatgggggcaaagttacgggccagcccagt
agtaaaacgagtttcgtcgtgctcggagacgatgctggaccgtccaagttggccaagatc
agatcaaacggaatcaagaccatcgatgagcatggcctctttgacctgatccgcaagctc
ccagcatttggcgggacgggcaagggcgctcagaaagcgcaagagaagaagaaggcggag
gaagagaaggtgaggcaacaggttgccgaaatggaagcggaagagaaagcacagaggcga
gaggccgagaaagaagccaagagattggccgcagcccgagggcaacccagcagcacgcct
gtcaagcctgcagccgcgcccacccagctcctcacgtccaagtatgcgccgacacagctg
aaccagatatgcggcaataaggcacaggtggagaagattcagcgatggcttcacaactgg
ccgaaatcgaagaagtacaacttccagaaacgtggcgctgatggcatgggaggcgagcga
gccatcatcatctctgggccccccggcattggcaagactacagctgcacacttggcggct
aagcttgaaggctacgatgttctggagagcaatgcgagcgatacacgaagcaagaagcta
gtcgaggccggtctcagcgacgtcatgaacaacacttccctgctgggattctttgcagga
gatgggaagtctgtccactctgagaagaagaagattgtgctcatcatggacgaagtcgac
ggtatgtcggccggcgatcgcggaggagttggcgccctggccaagttctgcaggaagacg
gaggtgcccttgatcctcatctgcaacgaacgaagactgcccaagatgaagccgttcgac
catgttgcgtttgatataagattcaaccgtccgacggtcgaccaagtccggtctcgcatc
atgacgatttgccatcgagaaggcttgaagatgcctccgccagtcgttgatgctctcatt
gagggcagcaacaaggatatccgccaaatcatcaacatgattgcgacagcgaagctcgac
cagtcgaccatgaactttgaccaaaccaagtccatgtcaaaagcgtgggagaagcatgtt
gtgctcaagccgtgggatatctgccagaagatgcttggtggcggactctttgcacctgca
agcaaggcgacgctcaatgacaagattgaactctacttcaacgatcacgagttcagctac
ctcatgatccaagaaaactacctccagacgaagcccatggccctcagcggctcggggtac
aggggtcgagaagctactttgaaagcgctcgagctctttgaccaggcggcagagagcatc
agtgacggtgaccttgtggatcgcatgatccacggaccgcagcagcaatggagcctcatg
cctacgcatgccgtcttcagtactgtgaggcctgcgagcttcgttgccggccagttgctg
gggtccaactttacgtcttggctcggaaataacagcaaagctggaaaattgggccgatac
attcgagagattcattcccacatgaggctcaagtcatcaggagaccataacgaggttcga
caggagtacttgcctgtgctgtggtcgcagacggtggatcggctgcagaaagaaggaact
gaagccgtggaagaggtcattgacctgatggacagctactacctcacccgagaagacttt
gacgccattcaggaactgggagtcggtcccatggacgaggagcgtgtcaagattgagacc
aagacgaaggctgcctttactcgaacatacaactccatgaaccacccattgcccttcatc
aaggccagcaatgtctttgcgccgaagaaacaaacgaaggagatgcccgacctggaagaa
gccattgaggaggaagatgacgccgagctgctggaagctccagacgttgacgaggatgac
gaaatcgatctgaagaaggataagtatatcaaacaaccaaaggtcaagaagccggcgaag
aaggcatcgaagacgagtactgga
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integrated database retrieval system
