Triplophysa rosa: 130557116
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Entry
130557116 CDS
T09216
Symbol
usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
tros
Triplophysa rosa
Pathway
tros03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130557116 (usp1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tros01002
]
130557116 (usp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130557116 (usp1)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130557116 (usp1)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130557116 (usp1)
Peptidases and inhibitors [BR:
tros01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130557116 (usp1)
Ubiquitin system [BR:
tros04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130557116 (usp1)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
130557116 (usp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
130557116
NCBI-ProteinID:
XP_057194603
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All DBs
Position
LG7:complement(9347779..9352646)
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AA seq
780 aa
AA seq
DB search
MSEVQCEGGGVAAASSPGKKSKLSLKFFQKKDTKRALDFETPAEENSAAEPEEATNHEQV
ALTSCPPIPLTCEKRECLVPFVGLNNLGNTCYLNSILQVLYYCPGFKEAIRSLCDLAKLK
DKQEDGVKNEENCRENIPAHMELLGSFHSLISSVEQLQSSFLLNPEKYSDEELATPPRRL
LNTLRQLNPMYEGYLQHDAQEVLQCILANIQEACDTIKKDQGDQKDATESNGTGESTHEE
DGNADGQLSGKRKSDTEAGNAKKKPKSRSKSKKSAESAPMTRSKRKSSSDITTESSLTDQ
KDADEQREKEQENERGSTAEEEKIDSSPKEVGKRTRKGKLGWLKPSGKQPSIFSKFRSMG
RITSHVGGKEESKEKLNCSAQEKQKKDTIKTGRTAQEIQVLEKKEERSGLDVLKWMFQGQ
LVLRTRCLECECYTERREDFQDISVPVQEDETSCSDSSSEISPDPKPELKTLKWAISQFA
SVERIVGQDKYFCENCHHYTEAERSLLFDKTPEVVTIHLKCFAANGSEMDPYAGLSKVNT
PLQTPLRLSLHEWCIQPDSPDQSHQYELFAVVMHSGVTISSGHYTTYIRMMDLHQTNLKP
QPQDEENEQEETKHQKTDEVPQTDYDDGEVSFSLSGRGKNVTNRASVTRMSSKAGSKRCS
EGVGLLGGQRSITSYELGNSKQTNPDKASSLTSRASSTVLQNAGVKKEMEEEGVDALGEG
TQVSFDSALRNLLDFEGKWMLFDDSEVRLFEEEYFLRACSSETCSTSTPYLLFYKRVSQP
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagtgcagtgtgaaggtggtggggtggctgccgcaagcagtccagggaagaaa
agcaaactctctctgaagttcttccagaagaaggacaccaaacgggccctggacttcgag
accccagcggaggaaaacagcgccgctgaaccagaagaggctacgaatcatgaacaggtc
gcgcttacgtcttgccctccaattcctctaacatgtgagaagcgagagtgcctggtccct
tttgttggtcttaataatttagggaacacctgctatctgaacagcatccttcaggtcttg
tattactgccctggtttcaaagaggccatcagatctttatgtgatttggctaaactgaaa
gacaaacaagaagatggtgtcaaaaatgaggagaactgtagagagaacatacctgctcat
atggagttgctgggcagtttccacagcctcatctcatctgtggaacagctacagtccagc
tttctccttaacccagaaaaatacagcgacgaagagctggccacaccaccccgcaggctg
cttaacactctcaggcagctaaatcctatgtacgagggctacctgcagcacgatgcacag
gaagtactgcagtgcatccttgcaaacatccaggaagcctgtgacaccattaaaaaagat
caaggagaccaaaaagatgccactgagagcaacggaactggtgagtccacccacgaggag
gacgggaacgctgatggtcagctgagtggaaagagaaagagtgacacagaagcgggcaat
gctaaaaagaagccaaagtctcggagcaagtccaagaaaagcgcggaaagcgcgcctatg
acccgatcgaaacgaaagtcctccagtgatataaccacagagagttctcttaccgaccag
aaagatgcagatgagcaaagggaaaaagagcaagagaatgagagagggagcacggcagag
gaagagaagatcgacagttcccctaaagaggtaggcaagaggacaaggaaagggaagctt
ggctggttgaagccatctgggaagcagcccagcatcttctcaaagttccgcagcatggga
cgaattacttcacatgttggagggaaagaggagagcaaagagaaattgaactgtagtgct
caagagaagcagaagaaggatacaataaaaactgggaggacagctcaggaaattcaagtt
ctggaaaagaaagaggagcgatcaggcctagatgtgctgaagtggatgttccagggtcag
ctggtgctgcggacacggtgcctggaatgtgagtgttacacagagagaagggaggacttt
caagacatcagcgtgcctgtgcaggaggacgagaccagctgctctgactccagttctgag
atttctccagatcccaagcccgagctgaaaactctgaagtgggccatttctcagtttgcc
tctgtggagcgaattgtgggtcaggataaatatttctgtgagaactgtcatcactacaca
gaagctgagagaagtcttctgtttgacaaaaccccagaagttgtcacaatccatttgaaa
tgctttgctgccaatggctcagagatggacccatatgccggcctttctaaggtgaacacg
cctctgcagactcctcttagactctcacttcacgagtggtgcattcaacccgattctcca
gaccagagccatcagtacgagctctttgctgtggtcatgcacagcggagtaactatcagc
agcggccattataccacttacatccgtatgatggatctccatcaaaccaatctcaagccg
cagcctcaggatgaagaaaatgagcaagaggaaactaaacatcagaagacagatgaggta
cctcagactgactatgatgatggagaggtgtcttttagcttgtctggcaggggaaaaaac
gtgacaaaccgggccagcgtcacgaggatgtccagcaaagcaggcagcaagaggtgctca
gagggtgttgggctcctaggaggacagaggagcatcaccagttacgagttaggcaacagc
aagcagaccaatcctgataaggcttccagcttgaccagtcgtgcctccagtactgtactt
cagaacgctggagtgaagaaagaaatggaggaagagggagttgatgctttgggtgagggg
actcaggtaagctttgactcggctctgcggaaccttttggactttgagggaaagtggatg
ttgtttgatgactctgaagtgagactatttgaagaggagtactttctccgagcttgttcc
tccgagacgtgctccacctctacaccatacctgctcttctacaaaagagtctctcagcca
taa
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