Trichoderma reesei RUT C-30: M419DRAFT_84579
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Entry
M419DRAFT_84579 CDS
T06031
Name
(GenBank) chromatin assembly factor 1 subunit C
KO
K10752
histone-binding protein RBBP4
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03082
ATP-dependent chromatin remodeling
trr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
M419DRAFT_84579
03083 Polycomb repressive complex
M419DRAFT_84579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trr03036
]
M419DRAFT_84579
Chromosome and associated proteins [BR:
trr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
M419DRAFT_84579
Histone modification proteins
HAT complexes
HATB complex
M419DRAFT_84579
HDAC complexes
Sin3A-HDAC complex
M419DRAFT_84579
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
M419DRAFT_84579
PRC2.2
M419DRAFT_84579
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
M419DRAFT_84579
Heterochromatin formation proteins
Other heterochromatin formation proteins
M419DRAFT_84579
Chromatin remodeling factors
NuRD complex
M419DRAFT_84579
NuRF complex
M419DRAFT_84579
NuRF complex (fruit fly)
M419DRAFT_84579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
MIOS_WD40
NBCH_WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-ProteinID:
ETR99946
JGI:
TrireRUTC30_1_84579
UniProt:
A0A024S6Z3
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MVHEEEDDLEERLINEEYKTWKKNSPFLYDMILGTALTWPTLTVQWFPDVKEPEGKNYRM
HRLLLGTHTSDDSANFLQIADVQIPKAVAPNPDHYDEERGEIGGYGKAGDVAALKCDIVQ
RIEHPGEVNKARYQPQNPNIIATLCVDGKILIFDRTKHPLQPATLGKVNAQIELIGHKAE
GFGLNWNPHEEGCLVSGSEDKTMCLWDLKTLEADSRILRPARRYTHHTQVVNDVQYHPIS
KNFIGSVSDDQTLQIVDLRSAETNKAALVATRGHLDAINALAFNPKSEVLVATASADKTI
GIWDLRNVKDKVHTLEGHNDAVTSLAWHPTEAGILGSGSYDRRIIFWDLSRVGEEQLPDD
LDDGPPELLFMHGGHTNHLADFSWNPNEPWLVASAAEDNLLQIWKVAESIVGKDDGDLPV
DELDR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgaggaggaagatgacctcgaagaacgcctcatcaatgaggaatacaagacg
tggaagaagaacagcccattcctctatgacatgatcctcggtaccgctttgacttggcct
actctcacggttcagtggttccccgacgtcaaggaaccagagggcaaaaactaccgcatg
caccgcctcctgctcggtacccatacctctgacgacagtgccaactttctccagatcgcc
gacgtccagataccaaaagccgtggcgcctaaccccgaccactacgacgaggaacgaggc
gagattggcggctatggaaaggcaggcgatgttgctgctctcaagtgcgacattgtgcag
agaattgagcatcccggcgaagtcaacaaggcccgctatcaacctcaaaacccaaacatc
attgccactctttgcgttgatggcaagatcctcatcttcgaccggacgaagcatcctctg
cagccagcaacgctgggcaaagtaaatgcgcagattgagctgatcggccacaaggcggag
gggtttggcctcaattggaacccgcacgaggagggctgtttggtgtcgggtagcgaagac
aagaccatgtgtctctgggacctgaaaactctggaggcagattcgcggatactgcgacct
gcccgcagatacacacaccacacccaagttgtcaatgatgttcaataccatcccatctca
aagaacttcattggctctgtctcagacgatcagactctgcagattgttgatttgcgatct
gccgagaccaacaaggccgctcttgtggcaacgcgtggccacctggatgccatcaacgcg
ctggccttcaatcccaagtccgaagttctcgttgccacagcctccgccgacaagacgatt
ggcatctgggatctacgaaacgtcaaagacaaggtgcacactctcgagggccacaacgac
gcggtaacatcccttgcctggcatcccaccgaagccggcattctgggaagcggcagctat
gatcggagaatcatcttctgggacctgtcccgcgttggcgaagagcagttgcctgatgac
ctggatgacggcccgcctgaattgctcttcatgcacggcggccacacaaatcatcttgcc
gacttcagctggaatcccaacgagccttggttggttgccagcgccgccgaagacaacttg
ctacagatctggaaagtcgcagagtccattgttggcaaggatgatggcgacttgccggtc
gatgagcttgaccgatag
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integrated database retrieval system
