Tenacibaculum retecalamus: PG912_10640
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Entry
PG912_10640 CDS
T08858
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
trt
Tenacibaculum retecalamus
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trt03016
]
PG912_10640 (truA)
Enzymes [BR:
trt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PG912_10640 (truA)
Transfer RNA biogenesis [BR:
trt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PG912_10640 (truA)
Prokaryotic type
PG912_10640 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WBX70694
LinkDB
All DBs
Position
2250153..2250887
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AA seq
244 aa
AA seq
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MRYFIELAYKGKNYHGWQIQPDAISIQEKINDAISTVLRQKIVITGAGRTDAGVHASQMF
AHFDTDIVLAENFAFRLNAILPDDIVIYNTKLVHDDAHVRFDASSRSYEYKIWLGRNPFS
LDTSWQLYNQQLNIDLMNQAAVILYEYEDFECFSKVKTGVHTFNCKVTNALWILNDNELT
FHISANRFLRNMVRAIVGTLIDIGTGKTTIDDFKKIIESKNRSNAGTSVPAKGLFLTKVA
YDYI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgaggtattttattgaactagcgtacaaaggaaaaaattatcatggttggcaaatacaa
cctgatgcaatttctatacaagaaaaaataaacgacgctattagtactgttttaagacaa
aaaatagttattacaggtgctggcagaacagatgctggtgtacatgcatcacaaatgttt
gcacattttgatacggatattgttttagctgaaaactttgcgtttagattaaatgctatc
ttgcccgacgatattgtaatatataatactaaattggttcatgacgatgcacatgttcgt
ttcgatgcaagcagtagaagttatgaatataagatttggcttggtagaaatccattttcg
ctagacacttcttggcaactatacaatcaacaattaaatatcgatttaatgaaccaagca
gccgttattttatatgaatatgaagattttgaatgtttttcgaaagtaaaaactggtgtt
cacacctttaactgtaaagtaacgaatgctttatggattttaaatgataatgaattaact
tttcatattagtgcaaatcgttttttaagaaacatggtgcgagcaattgttggtactcta
attgatattggaactggaaaaactactattgatgattttaaaaaaattatagaaagtaaa
aacagaagtaacgcaggaacatcggtacctgcaaaaggattatttttaacaaaagtagca
tacgactatatatag
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