Takifugu rubripes (torafugu): 101073935
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Entry
101073935 CDS
T02386
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101073935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
101073935
Spliceosome [BR:
tru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101073935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
101073935
NCBI-ProteinID:
XP_029694511
Ensembl:
ENSTRUG00000014923
LinkDB
All DBs
Position
7:complement(15493084..15498443)
Genome browser
AA seq
688 aa
AA seq
DB search
MSLNKREVEELKPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEAVEESRSSRSNKDGGERIRKRDLKDAFGEETETVTMREARGPGDGVTAKKKR
VPHFEEVDEPEVIPGPPTESPGMLTKLQIKQMMEAATKQIEERKKQLTFSSSSQTGGAAG
GASSIAPSKAASFMNDAIEKARKAAELQARIQSQLSMKPGILGALGNTGPHNLVALANLH
AMGIAPPVFNRKVEAKEVTKPTPLILDDKGRTVDATGKEIELTHRMPTLKANIRAVKREQ
FRQQLKEKPGEDLESTSYFDNRVTLNQAQRPRKGFKFHEQGRFEKIAQRIRTKAQLERLQ
NEISQAAKKTGIHASTKLALIAPKKEIEDGEIPNVEWWDSFILPSYINLAETNFDEVELF
GVTNLVEHPAQIRPPVDTNKQVTLGVYLTKKEQKKLRRQTRREAQKEVQEKVRLGLMPPP
EPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKEKKVKK
IKEDLSDGVHIAVYRIRNLQNPAKKFKVEANANQLYLSGTVVLHKDVNLVVVEGGPKSQK
KFKRLMLHRIEWVEHSSKRDDPDNDDDTKRNNKCWLVWEGTAKERSYGDMKFKQCPTESM
AREHFKKHGTEHYWDLALSLSVLETSDD
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaataaacgggaggtggaggagttaaaaccatgggtggagcgtactgtaaag
aaggtgctgggattctcagagccaacggtggtaacagcagctttgcactgtgttggcaag
ggcctggacaaacggaagactatagaccagctgcgtccttttctcgatgactctgctgga
gggtttgtcgagcgtctttttgaagccgtcgaggaaagccgcagttcccgtagcaacaaa
gatggaggagaaaggatccgtaagagagaccttaaggatgcttttggtgaagaaactgaa
actgttaccatgcgagaagctcgggggccaggagatggagtcactgccaagaagaaacgg
gtccctcattttgaggaagtggacgagcccgaggtcatacccggacccccaacagagagc
cccggcatgctcaccaaactgcagattaaacagatgatggaggctgccacaaaacagata
gaagagaggaagaaacaactgaccttttcttcttcgtcccaaaccggtggagctgcaggc
ggtgcctcttccatcgccccctccaaggccgccagcttcatgaatgacgccatcgagaag
gcccgcaaggctgcggagctgcaggcccgcatacagtcccagttatccatgaaacccggc
atcctcggagctttgggaaacactgggcctcacaacctcgtggcgctagctaatctacat
gctatgggaattgccccccccgtttttaataggaaagtcgaagccaaagaggtgaccaag
ccaacgcctcttattctggatgacaagggaagaactgtagatgccactggcaaagaaatt
gagctgacacaccgcatgcccacactgaaagcgaacattcgtgctgtaaaaagagagcag
ttccgtcagcagctgaaggagaaaccgggggaagacttggaatccacgtcctacttcgac
aaccgcgtgactctcaatcaagcccagcgtcctcgcaaaggcttcaaattccacgagcag
gggcgctttgagaagatcgcccagagaattagaaccaaggctcagctcgagaggttacag
aatgagatttcccaggcagccaagaagactggcatccacgcgtcgacaaagctggcgctg
atcgctccgaagaaggaaatcgaagatggtgaaattcccaacgtggagtggtgggactcc
ttcatcctaccgtcatacattaacttagcagaaacaaatttcgatgaggtggagttattt
ggtgtgaccaacctggtggagcaccctgcacaaattagacctcctgttgacacgaataaa
caagtaacgctgggagtttacctgacgaagaaggaacagaagaaactgagaagacaaacg
cgaagagaggcacaaaaagaagtacaggagaaagtccgtttggggctgatgcctccacca
gaacctaaagtgcgtatctccaatctgatgagagtgttggggacagaggccgttcaggac
cccaccaaggtggaggctcacgtcagagcgcagatggccaagagacagaaggctcacgag
gaagccaacgcagcccgcaagctcacagcagagcaaaggaaagagaagaaggtgaagaag
ataaaggaggacctctctgacggcgtgcacattgccgtgtacaggattcgcaacctgcag
aatccggctaagaagtttaaggtggaggccaacgcgaaccagctgtacctgtcaggaacg
gtggttttgcataaagatgtcaacctagtcgtggtggagggagggcccaaatctcagaaa
aagttcaagaggctgatgctgcaccgaatcgaatgggtggaacacagcagtaaaagagac
gatccagataatgacgatgacacgaagaggaacaacaaatgctggttggtttgggagggg
acagctaaagaacgtagttatggggatatgaaattcaagcagtgtcccacggagagtatg
gcccgagaacacttcaagaagcacggcacagaacactactgggacctggctctcagcctg
agcgtactggaaacctcagatgactga
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