Takifugu rubripes (torafugu): 101077928
Help
Entry
101077928 CDS
T02386
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tru03016
]
101077928 (tsen54)
Transfer RNA biogenesis [BR:
tru03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
101077928 (tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
101077928
NCBI-ProteinID:
XP_011602615
Ensembl:
ENSTRUG00000004230
LinkDB
All DBs
Position
5:13282303..13289062
Genome browser
AA seq
490 aa
AA seq
DB search
MSDQNTKDVEEKLYSEILSPCELFAARSRSHKIPIRGQKDFFPNDSEHQKQRLEQSLKEH
WSLLAEERVERLRNLAKANWIPSEQIVELQTPAGKFWQTMGFSSEGKQRLLPEEALYLME
CGNLQVFYQDLPFSIQDGYESFLSPSTVSLQQYQVFAHLKRLGYVVHRFDPSLVPSSYTR
QLNLPLSRDRAGRQLKRKRSASPPATSSQAEEQSQSTGDRMQEDKRHLAAPAGSSGTARR
TWWDTDDHMERTKRQPDSAPPHWRFSSIHFPDLGSTETPLLTSPDPSLLPGPFPVGGCDI
APWRQKINLRKVKMSAKDQERDEDKHRHQRDINKDREVQQCRNWAEYRELLVRRGRRPTR
RHECLWNREVTPLHDPRHPIPTAELLEKIRVTQSTHLLEGVSSIKGSDEWRICFNVYQPD
LVAGFKKSNPGKPYTRMCVCSFDGPVPDLRAIKLLTFQSGDVPVVIAVVDQGDISFYTFK
DFQLPVDVYP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccaaaacacgaaggacgtggaagaaaagctttatagtgaaattttaagtccc
tgtgagctgtttgcagcccggtccaggagtcacaaaatcccaatcagaggccagaaagat
ttcttccccaacgactcagagcatcaaaaacagcgacttgagcagagtcttaaggagcac
tggagccttttagcagaggagcgagtggagagactaagaaaccttgccaaggccaactgg
atcccaagtgagcagattgtagagcttcagactccagctggcaagttttggcagacaatg
ggcttctcttctgaaggcaaacagcgtctcctccctgaagaagctctctacctgatggag
tgtggaaacctgcaggtgttttaccaggacctgccgttctccatccaggacgggtatgag
agctttctgtccccgagcacagtgagcctccagcagtatcaggtttttgcgcatctgaag
cggctcggctatgtggtgcacagatttgatcccagtttggtgccgtcgtcctacacgaga
caactgaacctgcctctgtcacgagacagagcggggaggcagctgaagcggaagcgcagc
gccagcccacccgctacatccagtcaagctgaagaacagagccaatccacaggtgacaga
atgcaggaggataaaagacacctggctgcacctgcagggtcctccggaactgcccgcaga
acctggtgggacacagacgaccacatggaacgaaccaagcgccagcctgattctgctccc
cctcactggcgtttcagctccatccactttcctgacctgggctccacagagacccctctc
ttgacctcaccagatccctctctgcttcccgggccttttcctgtagggggctgtgatatc
gccccctggagacagaaaataaacctgcgcaaggtgaagatgtctgcgaaggatcaggag
agggacgaggacaagcacaggcaccagagggacatcaacaaggacagagaggtccagcag
tgcagaaactgggcagaatatcgagagctgctggtgaggagggggagaaggccaacacgt
cgacacgagtgcctttggaacagggaggtcacacccttacatgacccacggcatccgatc
cccacagcggagctgttggaaaagatccgtgtgacccagtctacacatttgctggagggg
gtgtccagcataaagggttcagacgagtggaggatctgtttcaatgtttaccagcctgac
ttggtggcaggctttaagaagagcaacccggggaaaccgtacacccgcatgtgtgtgtgc
agtttcgacggtcccgttcccgacctgcgggctatcaagctgctgaccttccagagcgga
gacgtccccgtggtcattgcggtcgtggaccaaggagacatctccttctacacctttaaa
gacttccagctgccagttgacgtgtacccctaa
DBGET
integrated database retrieval system
