Tropicibacter oceani: QF118_00225
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Entry
QF118_00225 CDS
T09169
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
try
Tropicibacter oceani
Pathway
try03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
try00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QF118_00225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
try03400
]
QF118_00225
Enzymes [BR:
try01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
QF118_00225
DNA repair and recombination proteins [BR:
try03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QF118_00225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WGW03998
LinkDB
All DBs
Position
complement(41255..42043)
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AA seq
262 aa
AA seq
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MPFTLATWNINSVRLRAPLVEKLLREEGPDVLCLQECKSPVDKIPLEGFQALGYTHMVAR
GQKGYNGVAILSKLPIRDVGDKDFAALGHARHVAGQLENGVIIHNFYVPAGGDKPDRAVN
EKFGQKLDYLSEMRDWFYAGRPEKSILVGDLNIAPLDDDVWDHKKMLKVVSHTPIEVEAL
GAAQDAGGFVDVTRRDVPEGKLYSWWSYRARDWDEADKGRRLDHVWATPDISNAAHSSRV
LRAARGWEQPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgccctttacccttgccacctggaacatcaactcggtccgactgcgcgcgcctttggtc
gaaaagcttttgcgcgaagaggggccggatgttctgtgtttgcaggaatgcaaaagcccg
gtggacaagatcccgctggaggggtttcaggcgctgggctacacccacatggtagcgcgc
gggcaaaagggctacaacggcgttgcgatcctgtcgaaactgccgatccgcgacgtcgga
gacaaggatttcgcggcattgggccacgcccggcacgtcgcggggcaattggaaaacggc
gtgatcatccacaacttttacgtccccgctggcggcgacaaacccgaccgtgcggtgaac
gaaaagttcggccagaaactggactacctgagcgagatgcgcgactggttctacgccggt
cgtccggaaaaatccatccttgtcggggacttgaacatcgcgccactggacgatgacgtc
tgggatcacaagaaaatgctcaaggtcgtcagccataccccgatcgaggtcgaggcgctg
ggcgcggcgcaggacgcgggcggattcgtcgacgtgacgcgccgcgatgtgcccgagggc
aagctgtattcgtggtggtcctaccgcgcgcgcgactgggacgaggcggacaagggccgg
cggctggatcacgtctgggcgacgccggatatttccaacgcggcgcactcgagccgggtg
ctgcgggcggcgcgcggctgggaacaacccagcgatcacgccccggttttcgcgacgttc
gacctgtaa
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