Tritonibacter scottomollicae: R1T40_15385
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Entry
R1T40_15385 CDS
T09466
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R1T40_15385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsco03400
]
R1T40_15385
Enzymes [BR:
tsco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
R1T40_15385
DNA repair and recombination proteins [BR:
tsco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
R1T40_15385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WOI32333
LinkDB
All DBs
Position
complement(3080243..3081031)
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AA seq
262 aa
AA seq
DB search
MSFTLATWNINSVRLREPIVLKLLEEEGPDVLCLQECKSPVDKIPMEAFRALGYTHMVAR
GQKGYNGVAILSRLPIEDAGDKDFAGLGHARHVAGRLENGVTIHNFYVPAGGDEPNREKN
VKFGQKLDYLTEMRDWFHAERPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHL
AQVMEAGGWADVTRNDIPEGQLYSWWSYRAKDWDAADKGRRLDHVWTTSDITNAAHSSRV
LRAARGWEKPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttaccctcgccacttggaacatcaactccgtgcgcctgcgcgaacccatcgtg
ctgaagcttctcgaagaggaggggccggatgtgttgtgcctgcaggagtgcaagagcccg
gtggacaagatcccgatggaggcgttccgggcgctgggttacactcatatggttgcgcgc
ggacagaagggctacaatggagtggcgatcttgtcccggcttcccatcgaggacgcgggc
gacaaggacttcgccggcctcggccatgcccgccatgtggcgggacggctggaaaacggc
gtcaccatccacaatttctacgtgcctgcgggcggtgatgagccgaatcgcgaaaagaac
gtgaagttcggtcaaaaactcgactacctcaccgagatgcgggactggttccacgccgag
cggcccgagaaatcggtgcttgtgggcgatctcaatatcgccccgcgcgaggatgacgtc
tgggatcacaagaagctgctgaaggtggtgagccatacgccgatcgaggtggagcacctg
gcgcaggtgatggaggccggtggctgggccgatgtcacccgcaacgacattcccgagggg
cagctttacagctggtggagctaccgtgccaaggattgggatgccgccgacaaggggcgt
cggctcgaccatgtctggaccacgtcggatatcaccaatgccgcacactcgagccgggtc
ctgcgcgcggcgcggggttgggaaaagcccagcgatcacgcgccggtctttgccaccttc
gatctctga
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