Terrihabitans soli: IZ6_27800
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Entry
IZ6_27800 CDS
T07468
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
tso
Terrihabitans soli
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tso03019
]
IZ6_27800
Enzymes [BR:
tso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IZ6_27800
Messenger RNA biogenesis [BR:
tso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IZ6_27800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_30
AAA_19
Flavi_DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCJ92045
UniProt:
A0A6S6QWV5
LinkDB
All DBs
Position
complement(2685910..2688390)
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AA seq
826 aa
AA seq
DB search
MIAPVRTFQDRLPIDEAIPALISALQEGVSAVLVAPPGAGKTTRVPLVLLDEAWRGDGRI
ILLEPRRIAARAAADRMASTLGEKTGDTVGLRVRLGSKISAKTRIEVVTEGVFARMILDD
PELKGVAAVLFDEFHERSMDGDLGLALALDAQSALRPDLRLLVMSATLDGARVAKLLGDA
QVVESLGRSFPVDTRYSARDPRARLEDEAVQAVRRAMGEEGGSALVFLPGQAEIRRTAER
LREKMSPDIDIVELHGGLDARDQDRAIRPAPQGERKVVLATSIAETSITIEGVRIVIDCG
LSRVPAFEPSTGLTRLETVRVSRAQADQRRGRAGRTEPGICYRLWEEAATASLPAFQTPE
ILAADLSGLVLDLAAWGVSDPSALSFLDPPPSAAWTEAKKHLVELGALEESGRITPRGQN
IRRLPLPPRLAAMMLEAARIGVARQAADIAVIVVERGLGGDGTDIVHRVDMFRRDRSRRA
EDARRLAEGWAREAQALAPKEEDSEIGLGAVLARAYPDRVAQARGKQGEFRLANGRGASV
EPHDALAREPYLAVAEIAGAAGSARIRLAAAISREDIEKLFADRIEAREDIVFDPQTASV
RGRAARKLDALILSDAPLKSPRDESAAKILAEGVAALGVSRLPWTKPLEQWRERVGFLRR
AEGETWPDLSDDALSKNASEWLAPYLTGKAALSEVSASDLDQALKALLPYDLSRRLEKEA
PTHFTAPTGSSLAVDYSGTEPMISVRVQELFGLDAHPSLAGGKVPLVLELLSPAHRPVQV
TRDLPGFWRGSWAGVRADMRGRYPRHPWPEDPRIAEATRRAKPRGT
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgcccccgtgcgtactttccaggacagactcccgattgatgaggccatcccggcg
ctgatttccgcgctgcaggagggcgtaagcgccgttctcgtggcgccgccgggcgccggc
aaaaccacacgcgtgcccttggttctcctggacgaggcgtggcgaggcgacggtcgcatc
attctgctcgagccgcggcggattgcggcgcgcgccgccgccgaccgcatggcctcgacg
ctcggcgaaaagaccggcgatacggtcggtctgcgtgtgcggctcggatcgaagatttcc
gcgaagacgcgcattgaggtcgtcacggaaggtgtgttcgcgcgcatgatcctcgacgat
cccgaattgaagggtgtcgccgccgttctcttcgacgaattccatgaacggtccatggac
ggcgatctcggccttgcgctggcgctcgatgcgcaatcggcgctccggccggatctgcgc
cttctggtcatgtcggcgacgctcgacggcgcgcgcgtcgccaaactcctcggcgatgca
caggtcgtcgagagtcttggccgcagtttcccagtcgatacgcgctattcggcgcgcgat
ccgcgggcccggctcgaggatgaagcggtgcaggcggtgcgccgcgccatgggcgaggag
ggcggcagcgcactcgtctttctgcccggccaggccgaaatccgccgcacggcggaacgg
ctgcgcgagaagatgagtcccgatatcgatatcgtcgaactgcatggcggccttgatgcc
cgcgatcaggaccgcgcaatccgcccggcgccgcaaggcgaacgcaaggtcgtgcttgcg
acctccatcgccgaaacatcgattacgattgagggcgttcgcatcgttatcgattgcggc
ctgtcgcgcgtgccggcgttcgagccgtcgacaggcctgactcgtcttgaaaccgtgcgc
gtctcacgcgcccaggccgatcagcgccgtggccgcgccggccgcaccgaacccggcatc
tgctaccgtctgtgggaggaagcggcgacggcgagccttcccgcgttccagacgccggaa
attcttgcagccgatttatcgggtctcgtactcgatctcgccgcctggggcgtcagcgat
ccctccgctctgtctttcctcgatccgccgccctcggccgcctggacagaggcgaagaag
catctcgtcgaactcggcgcgctggaagaaagcgggcgcattacgccgcgcgggcagaac
atccgccgtttgccgctgccgccgcgtctcgcggccatgatgctggaagcggcccgcatc
ggggttgcgcggcaggccgccgatatcgcggtgatcgtggtcgaacgcgggcttggcggc
gacggtacggacattgttcaccgggtcgatatgttccgccgcgaccgctcgcgccgcgcc
gaagatgcgcggcgtctggctgaaggctgggcgcgcgaagcgcaggcgcttgccccgaaa
gaagaggatagcgaaatcgggctcggtgcggtcctcgcccgcgcctatcccgaccgggtg
gcgcaggcgcgcggcaagcagggtgagttccgtctcgccaacgggcgtggtgccagcgtc
gagccgcacgatgctctggcgcgcgagccctatcttgccgtagccgaaattgcgggcgcg
gcaggttcggcgcgcatccgtcttgccgccgcgatctcgcgcgaagacatcgaaaagctt
tttgccgaccgcatcgaagcgcgcgaagacatcgtgttcgatccgcagacagcttcggtg
cgcggccgcgcggcacgaaaactcgatgcgcttatcctgtccgatgcgccgctgaaatcg
ccgcgcgatgaatcggcagccaaaatccttgccgaaggggtagccgcgctcggtgtttcg
cgcctgccatggacgaagccgcttgagcaatggcgcgagcgtgtcgggttcctgcgccgc
gccgagggcgaaacctggcccgatctgtcggatgatgcgctctcaaaaaatgccagtgag
tggcttgcaccttatctcactggcaaagccgcgctgtcggaggtttcggcatccgatctc
gatcaggcgctgaaagcgcttttgccctacgatctttcgcgacggttggagaaagaagcg
ccgacgcatttcaccgcgccgacggggtcatcgctggcggtcgattattccggaaccgag
ccgatgatttcggtgcgcgtgcaggaattgttcggcctcgatgcgcatccctcgctcgcc
ggcggaaaagtgccgctggtgctcgaacttctgtcgcccgcgcaccgtccggttcaagtg
acgcgcgatctgccgggcttctggcgcggctcatgggcgggcgtacgcgccgatatgcgc
ggacgttatccgcgccatccctggccggaagatccgcgcattgcggaagccacgcgccgt
gccaagccgcgcgggacttaa
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