Terrihabitans soli: IZ6_30840
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Entry
IZ6_30840 CDS
T07468
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tso
Terrihabitans soli
Pathway
tso03030
DNA replication
tso03410
Base excision repair
tso03420
Nucleotide excision repair
tso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IZ6_30840 (polA)
03410 Base excision repair
IZ6_30840 (polA)
03420 Nucleotide excision repair
IZ6_30840 (polA)
03440 Homologous recombination
IZ6_30840 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tso03032
]
IZ6_30840 (polA)
03400 DNA repair and recombination proteins [BR:
tso03400
]
IZ6_30840 (polA)
Enzymes [BR:
tso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IZ6_30840 (polA)
DNA replication proteins [BR:
tso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IZ6_30840 (polA)
DNA repair and recombination proteins [BR:
tso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IZ6_30840 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IZ6_30840 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
Taq-exonuc
HHH_2
HHH_5
MIER1_3_C
Motif
Other DBs
NCBI-ProteinID:
BCJ92349
UniProt:
A0A6S6QTC6
LinkDB
All DBs
Position
complement(3031249..3034287)
Genome browser
AA seq
1012 aa
AA seq
DB search
MTEQPIKPGDHVFLVDGSSFVFRAYFQSMNQDAKYNYRSDGLPTGAVRLFCTKLYQFVRE
GAVGIRPSHLAIVFDKSEDTFRKEIYPDYKANRKDPPDDLIPQFPLMREAVKAFGLEPIE
KAGFEADDIIATFAGQAGKAGAEVLIISSDKDLMQIVTPNVNFYDFESGRKGSPGYRPER
KIDIQGVIDYFGVPPEGVTDVQALVGDTSDNVPGVPGIGIKTASQLMAEFGTLENLLART
SEIKQPKRRESLETYADQARLSKKLVTLDCNVETEFQLPQLQVPDFDPKKLIAFLKAMEF
TTITKRVADAFDIDANEIEADSRLKPGSGRYTENAETPSPRERGEGRGEGQETPSHPATA
SPSADLSPQAGRGSTSAGDFTPAALAEKLIAEARSAPCAKDHYDTIRTEERLDQWITAIR
DKGRFAFDTETTSLDAMQAELVGISLAVDPGLAAYIPIGHVSGKADMFGGGLAPDQLKLD
LVLKKLKPLLEDPGVLKIAQNGKYDALVLSRLGVDVKPIDDTMLLSYALDSGRGGHGMDE
LAQKWLSHTCIAYNDVTGTGKGRISFAEVEIDKASDYSAEDADITFRLWRVFKARIVAEG
MIGVYETLERPLLPVLMRMEERGISIDRNMLSRLSGDFAQSMGALEEEIFTLAGERFNLG
SPKQLGDILFGKLGFEGASKTKTGAWATGASVLEDLALEGHELPRKILDWRQLSKLKSTY
SDALPGYVNPETKRVHTSFSLASTSTGRLSSSEPNIQNIPIRTEEGRKIRKAFIAPPGRK
LISADYSQIELRVLAHMADIPQLKKAFADGLDIHAMTASEMFGVPVEGMPADVRRRAKAI
NFGIIYGISAFGLANQLSIPRDEAGAYIKKYFERFPGIRDYMDRMREQAKSVGYVTTLFG
RKCHYPLNEARSPAERGFLERAAINAPIQGTAADIIRRAMIRMEDALLSEKLSAQMLLQV
HDELVFEVPDEEVDKTIPLICRVMEKAAEPAVHLDVPLKVDARAAQNWDEAH
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagcccatcaagcccggcgaccacgtctttctggtcgacggctcttccttt
gttttccgcgcctacttccagtccatgaatcaggacgcgaagtacaattaccgctccgac
ggattgccgacgggggcggtgcggctgttctgcaccaagctctatcaattcgtgcgcgag
ggcgcggtcggcatccggccgagccatctcgccatcgtcttcgacaaaagcgaagacacg
ttccgcaaggaaatttatccggactacaaggccaaccggaaagatccgccggacgatctc
attccgcaattcccgctgatgcgcgaagcggtcaaagcgttcgggctcgagccgatcgag
aaagcaggctttgaagccgacgacatcatcgcgacctttgccggccaggccggcaaagcc
ggcgccgaagttctgatcatctcgtccgacaaggatctgatgcagatcgtgacgccgaac
gtgaacttctacgatttcgaatccggtcgcaaaggcagccccggttacaggccagagcgc
aagatcgatatccagggcgttatcgattatttcggcgtgccgccggaaggcgtgacggat
gtgcaggctttggtcggcgacacatccgacaatgtgccgggcgttcccggcatcggcatc
aagacggcctcgcagctgatggcggagttcggcacgctcgagaatcttctggcgcgcacg
agtgagatcaaacagcccaaacgccgcgagagtctcgagacctacgccgatcaggcgcgg
ctgtcgaaaaagctcgtgacgctcgactgcaatgtcgaaaccgagttccagctgccgcaa
ttgcaggtgccggacttcgatccgaaaaaactcatcgcgtttttgaaggcgatggaattc
acgaccatcaccaaacgcgttgccgacgcgttcgacatcgacgcgaacgagatcgaagcc
gatagccgcctgaagccgggatcaggccgctatacggaaaatgcagaaactccttctccc
cgcgagcggggagagggtcggggtgaggggcaagaaactccctctcacccggcgaccgct
tcgccgtctgccgacctctccccgcaagcggggcgaggctcgacctcagccggagatttc
acgcctgcggcgctcgcggaaaagctgatagcagaagcgcgctcggctccctgcgcgaag
gatcattacgacacgatccgcaccgaagagcgtcttgatcaatggatcacggcgatccgg
gacaaaggccgttttgccttcgacaccgagacgaccagcctcgacgccatgcaggcggaa
ctcgttggcatctcgcttgccgtcgatccggggctcgcagcttacattccgatcggccat
gtcagcggcaaggccgatatgttcggcggcgggctcgcgcccgatcagctgaagctcgat
ctcgtgctgaaaaagctgaagccgcttctggaagatccgggcgtgctgaagatcgcgcag
aacggcaaatatgatgcgctcgtcctgtcgcggctcggcgtggatgtgaagccgatcgac
gatacgatgctgctgtcttacgcgctcgattcaggccgcggcgggcacggcatggacgag
ttggcgcagaaatggctaagccatacctgcatcgcctacaacgacgtcaccggcaccggc
aagggccgcatcagtttcgccgaagtcgagatcgacaaagcttcggactattcggcggaa
gatgccgatatcaccttccggctctggcgcgtcttcaaggcgcgcatcgtcgcggaaggc
atgatcggcgtttacgagacgctggagcgtcctttgctgcccgtgctgatgcgcatggaa
gagcgcggcatttccatcgaccggaatatgctgtcgcgcctctccggcgatttcgcgcag
agcatgggcgcgctcgaagaagaaatcttcacgctcgccggcgagcgcttcaatctcggc
tcgcccaaacagctcggcgatatcctgttcggcaagctcggtttcgagggcgcgtcgaaa
accaagacgggcgcctgggcgacgggcgcgagcgtgctcgaagatcttgcgcttgaggga
catgaactaccgcgcaagattttggattggcgtcagctgtccaagctcaaatcgacctat
agcgatgcgctgccgggctatgtgaacccggagacgaaacgcgtccatacgagtttctcg
ttggcttcgacctcgacgggacgactgtcctcgtccgagccgaacattcagaacattccg
atccgcaccgaagaaggccgcaagatccgcaaggcctttatcgcgccgccggggcggaaa
ctcatttcggccgactattcccagatcgaactgcgtgtgctggcccatatggccgatatc
ccgcagctcaagaaagcctttgccgacggtctcgatattcatgccatgacggcgtcggag
atgttcggcgttccggtcgaaggcatgccggccgatgtgcgtcgccgcgccaaggccatc
aatttcggcatcatctacggcatctcggccttcggcctcgccaatcagctgtcgatcccg
cgcgatgaggcgggcgcctatatcaagaaatatttcgagcgcttccccggcatccgcgat
tacatggaccgtatgcgcgagcaggcgaaaagcgtcggctatgtcacgacgcttttcggg
cgcaaatgtcattacccgctgaacgaagcgcgttcgccggccgaacgaggcttcctcgag
cgcgcggcgatcaatgcgccgatccagggcacggcggccgatatcatccgccgcgctatg
atccgcatggaagatgcgcttttatccgaaaagctatcggcgcagatgctgctgcaggtg
catgacgaacttgtctttgaagtgcccgatgaggaagtcgacaagactatcccgctcatc
tgccgcgtgatggaaaaggcggcggaaccggcggtgcatctcgacgtgccgctgaaggtc
gatgcccgcgccgcgcagaactgggacgaggcgcattag
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