Trichinella spiralis: Tsp_00220
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Entry
Tsp_00220 CDS
T01609
Name
(RefSeq) putative nucleotidyltransferase domain protein
KO
K14079
poly(A) RNA polymerase GLD2 [EC:
2.7.7.19
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_00220
Enzymes [BR:
tsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Tsp_00220
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
Tsp_00220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
Tnp_22_trimer
PAP_central
Bromodomain
DASH_Dam1
Motif
Other DBs
NCBI-GeneID:
10901495
NCBI-ProteinID:
XP_003376021
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MDVLVNREGHLMENTIPHSSLVIRGTYYRALFGDALEESYSSVGTRTLETTHTSTSAEQG
DSSNSNVENDSYNNNAVAPPSRKRFHGSNDSYDRVFAKKMKPDDVENDMALVKCVVKSEL
VDCFMLESSKKCNRNANNSNVHKLADTSVEVIDLTSELDKSWLPLDEQIQQFFLLNAEPE
RVTQQKVAAVKQLANYVKEYNRKAKVYMFGSTLSKIASRNSDIDLCIIDDKKLFSSLNVE
FHRKESKRRLHRYKSKFDNLHLACPLNAFNIINATVPIMISKFKEPYSFRADISMNSLSG
IRSSLLIRHYATADERFAKLAVLIKCWANKKFPGGAKNGYIGGFAWTLLLLNYMQCGTGE
NCPPVFPSFQERYPSLYEKSLNEMDFEGKFPENFVSPNKQSLSSLLYGFFYFYAYCVDFL
KTMFSVRKGSIFLRQPEHAKFFMYIENPINLKNVAKSLQMKKKYEQIKAEIINAYDILAS
TCSVDSLFE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggacgttttggtcaatcgagaaggtcatttgatggaaaacacgattcctcattcttct
ctggtaattcgaggtacttattatagagcattgtttggggatgctcttgaggaaagttat
tcttcagttggaacgagaactctcgaaacaacgcatacttcaacgtcagcagagcaaggt
gactcatcaaatagtaacgttgaaaacgactcgtacaacaataatgcagttgcgcctcca
tcgcgaaaacgatttcacggatcgaatgattcatatgatcgtgtttttgcgaaaaagatg
aaacccgacgacgtagaaaatgatatggcattggttaaatgtgtagtgaaaagtgaatta
gtcgactgtttcatgttggaatcttcaaaaaagtgtaatagaaatgcaaataattcgaat
gttcataaacttgccgatacttctgtagaagtgatcgatttgacatcagaattagataaa
agttggttgccgttggatgaacaaattcagcagttctttttgctaaatgcagagcccgag
agggtgacgcagcaaaaggtggccgccgtgaaacaattagcaaactatgttaaggagtac
aatagaaaggctaaagtttatatgtttggtagcacgctttcaaaaattgcaagtagaaat
agtgatatcgatctttgtattattgatgataaaaagttattttcgagcttgaacgtcgaa
tttcacagaaaagaaagcaagcgaaggttgcatcgttataaaagtaaatttgataatctt
catttggcgtgcccgttgaatgccttcaatataatcaatgccacagttccaattatgatt
tctaagttcaaagagccctattctttcagagctgatattagcatgaattcactttctgga
atcaggtcgagcttgcttattcgacattacgccacggctgacgaacgatttgcaaaattg
gccgtcttgatcaaatgctgggcaaataagaagtttccaggtggtgccaagaatggatac
atcggcggattcgcttggacgttgttgttattaaattacatgcagtgtggaacgggagaa
aattgtccccccgtgtttcccagttttcaggaacgttacccttcgttgtatgaaaaatcg
ctgaatgagatggatttcgaaggaaaatttcctgagaatttcgtctcgccaaacaaacaa
tcactgtcaagtcttttgtatggctttttttatttctacgcttattgtgtcgactttctc
aaaacgatgttttccgtacgaaaaggttcaatttttctccgacaacccgaacacgcgaaa
tttttcatgtacattgaaaatccgatcaatttgaaaaatgtggcaaaatcgttgcagatg
aaaaaaaaatatgaacaaattaaagcggaaatcattaacgcctacgacatactggcgtcc
acttgttcagtggacagtttgtttgaataa
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