Trichinella spiralis: Tsp_05093
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Entry
Tsp_05093 CDS
T01609
Name
(RefSeq) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Tsp_05093
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsp01007
]
Tsp_05093
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsp03016
]
Tsp_05093
Enzymes [BR:
tsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Tsp_05093
Amino acid related enzymes [BR:
tsp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Tsp_05093
Transfer RNA biogenesis [BR:
tsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Tsp_05093
Prokaryotic type
Tsp_05093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
10908590
NCBI-ProteinID:
XP_003369685
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MIRLQKLFIRKMGQFSQIAARRPELDFDRLLNPENLASIRENIRCRKQVGDIDQLHRLWN
NMQTVIQDKNPTMTMNELTSMWDRFYEEALLIPNDTHPEAPVGDESVAKIIHTNGSKPIF
TFKPLFGEDIAVKFKILWQDVGFCCGEKAYFLYNQLAILELALIRFCRDRLRSSGYEEVV
VPDVIPKRIVENCGLMNRTDKEIVYSIHGLPNWTLSGTAEMGLASFIENRIFDVNEMPKK
FFSVSRCFRPEVATGKLSKGLYRVHEFTKVEMFICTANETGLESNISHLEILEMQKLLFS
ELNLHFNVLEMPTEELGASAFRKFDIESWFPGRDCYGEISSASNCTDYQSRRLLTKYKSS
DGNLKFVHTVNKSIKLAKQNVNGTACALSRTLIAMLEQFQCKNRQVNIPKFLLDYVNVEM
KRQYAERKPLSLLRINPKTVFEC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgataagattgcagaagttgtttatccgaaagatgggtcaatttagccaaatagcagct
cgtagaccggagttggattttgaccgtttgttgaatccagaaaatttggccagcatccgg
gagaacatacgctgtcgaaagcaagttggtgatattgatcagttgcatcgcctgtggaac
aacatgcaaactgtaatacaagacaaaaatccaacaatgaccatgaatgaattgacatca
atgtgggatcgattttacgaagaagcactacttataccaaacgatacacatcctgaagct
ccagtcggggatgaaagtgtagcaaaaattattcacaccaacggttcgaaaccaatattc
acattcaaacctctctttggtgaagatatagctgtgaaatttaaaattctctggcaagat
gtgggattttgctgtggtgaaaaagcatattttctgtacaaccagctggccatattggaa
ttggctttaatacggttttgccgtgatcgattgcgcagcagtggttacgaagaggtggta
gttccggatgtgattccaaagcgaattgtggagaattgcggtttgatgaatcgtacggat
aaggaaattgtctattcaatacacggtttgcccaactggacactgtctggcacagcagaa
atgggattggctagtttcattgaaaatcgtatatttgacgtgaatgagatgccgaagaaa
tttttcagcgtcagtcgttgcttcaggcctgaagttgctaccgggaaattatccaaaggc
ttgtacagagtccatgaatttacaaaggtggagatgttcatatgcactgcaaacgaaact
ggcctagaaagtaacatctctcatttggaaatattggaaatgcagaaattgcttttttct
gaacttaacttgcacttcaacgtgttagaaatgccaactgaagaacttggtgcttcagct
ttcagaaaatttgacatcgaatcgtggtttccaggaagggattgttatggcgaaatttcc
agtgcttcaaattgtactgactatcaatctagacgtttgttgaccaaatacaaatcatcg
gatggtaatttgaaatttgtccacacggtaaacaaatccattaaacttgcaaaacagaac
gtcaatggaacagcatgcgcattatcaagaacgcttattgcaatgctggaacagtttcag
tgtaagaatcgtcaggtgaatattccgaaatttttgttagactacgtcaacgttgagatg
aaaagacagtatgcagaaaggaagcctctctctttgttgcgcatcaatccaaaaactgtt
tttgaatgttaa
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