Trichinella spiralis: Tsp_10024
Help
Entry
Tsp_10024 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K17820
ATP-dependent RNA helicase DHX33 [EC:
5.6.2.6
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_10024
Enzymes [BR:
tsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Tsp_10024
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Other ribosome biogenesis factors
Tsp_10024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
ABC_tran
AAA_34
Motif
Other DBs
NCBI-GeneID:
10905506
NCBI-ProteinID:
XP_003373178
UniProt:
E5SKP4
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSRKHRKKKKSESKKKKHSRPHVEKLKQARQKLPIYACKEKILRLLKDNQSLIIIGETGC
GKSTQIPQIIYDEWLHDGMVIGITQPRRVAAVTLAKRVSEEMNVHLGQEVGYSVRFDEVA
SSQTQIFYLTDGMLIREAMFDPMLERYSFVILDEAHERTLHTDVLFGVVKQAQRKRKARK
LHSLSVVIMSATMDADRVSKYFNNAPVAYCQGRQHSIQTFYCSGSFTDDYVLNCLITVFQ
LHRTKPPGDGDVLVFLTGQEEIERAVRKCKEASEHLNSGTYGPLIVLPFYAGLSTHAQMR
VFKEKNDDEYDKEKRKLKSKKSSKHSSSSKKRKDEKKQRRVVIATNIAETSVTIPNIRYV
VDSGKVKLRCYDPSRGIDMLKVVDISKAQADQRAGRAGRVAAGECYRIYDEQKFDKLLDH
TEPEIRRCSLTGTLLQLLMMGIRNPNTFDFIDPPTKESLEAARLVLSQLGAVVVHREKLS
LTDLGRTMAEFPVEPKLARLILASAKLHCSEEMIQIVSVLSAGSVFVEETVENDEDAQTC
RRSQKFFQPEGDLIRLLQVFRAWQAVRGISISQSDARREWCKEQGMHYRALYSAGKICSQ
LRRICHSLGVPLTSCGENWKILRRALCYGFFMQAAFLDEQFTVGKATTYRVLGSDLRAKI
HPSSCLYQHKPACLLYAELVLTNDLYLRDVTVVEPQFLLDAAPDYFAAHHIELFHS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggaagcacaggaagaagaaaaagtcagaatcgaaaaagaagaagcattcacga
ccgcatgttgaaaagttgaaacaagcgcgtcagaagcttccaatatatgcttgtaaagag
aaaatactgagattgttgaaggataatcaatcattgataattattggtgaaactggttgc
ggtaaaagcactcaaatacctcagattatatacgatgaatggttgcacgatggtatggtt
attggcattactcaacctcgtcgggttgcagcggtcactttggctaagcgcgtttcagaa
gagatgaacgttcatcttggccaagaagtcggctattctgtccgctttgatgaagttgca
tcttctcagactcaaattttctacttgaccgacggaatgcttattcgtgaagcgatgttt
gacccaatgttggaacgttattcatttgtcatattggacgaagcgcacgagcgcactctt
catacggatgttctgtttggcgtggtgaagcaggcccaaagaaagcgcaaagcgagaaaa
ttgcacagtctgtcagtggtcataatgtcggcaacaatggacgcagatcgtgtgtcgaaa
tattttaacaacgcaccggttgcttattgtcaagggcgccagcattctatacagacattt
tactgcagtggaagttttaccgatgattacgttttgaactgcttgattactgtttttcag
cttcatcgtaccaagccgcccggtgatggggatgtgttggtatttttgactggtcaagag
gaaattgaacgcgccgtacgcaaatgcaaagaagcttcagagcacttgaacagtggaact
tacggtccgttgattgtacttccattctacgctggattgtcgactcatgcgcagatgcgt
gttttcaaagagaagaatgatgatgaatacgataaggagaagagaaaattgaaaagtaaa
aaatcctcaaagcacagcagcagtagtaaaaagcgaaaagacgagaaaaagcaacgccgt
gtggtgattgcgacgaacattgccgaaacgtcggtaacaattcccaatattcgttatgtt
gttgattcgggaaaagtgaaacttcgctgctacgatccaagccgtggaatagatatgctt
aaagttgtcgacatttccaaagctcaggcagatcagcgtgctggtcgtgctggtcgtgta
gctgctggtgaatgttatcgtatatatgatgagcagaagtttgacaaactgctcgaccat
accgaaccggagattcgccgttgctctttaactggaaccttgttgcagttgttgatgatg
ggaatccgaaatccaaatacattcgatttcattgaccctccgacgaaagaatccttggaa
gcggcccgtctcgtgctttcgcagttgggagcggttgttgtgcaccgtgaaaaattatcg
ctcaccgatcttgggcgcacaatggctgaatttccagtggaaccgaaattggcaaggttg
attttggcgtctgcaaaattgcactgttccgaagagatgattcaaattgtgtccgttctc
tcagctgggtccgtatttgtggaagagactgttgaaaatgatgaagatgcgcagacttgt
cgtaggagtcaaaagttttttcaacccgaaggcgatctgattcgcctgcttcaagtgttt
cgagcatggcaagcggttcgtggaatcagcatcagtcaatccgacgcacgtcgcgaatgg
tgcaaagagcagggcatgcattatcgagctttgtattcggccggaaaaatatgctcccaa
cttcgacgcatatgtcacagccttggagtgccgttgacttcttgtggcgaaaattggaaa
atactacgccgcgcactgtgctatggatttttcatgcaagcagcttttctcgacgaacaa
ttcaccgtcggcaaagcgactacatacagagttctgggtagcgatttgcgcgccaaaata
catccatcttcttgtctgtatcagcacaagccggcctgcttgctttacgccgaacttgtg
cttaccaatgatctttatcttcgagatgtaactgttgtcgaaccgcaatttttgctcgac
gctgcccccgattactttgcggcacaccatattgaattattccactcttag
DBGET
integrated database retrieval system
