Thamnophis sirtalis (common garter snake): 106539497
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Entry
106539497 CDS
T06107
Name
(RefSeq) thrombospondin-4-like
KO
K04659
thrombospondin 2/3/4/5
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04145
Phagosome
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106539497
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106539497
09144 Cellular community - eukaryotes
04510 Focal adhesion
106539497
09142 Cell motility
04820 Cytoskeleton in muscle cells
106539497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106539497
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106539497
00536 Glycosaminoglycan binding proteins [BR:
tsr00536
]
106539497
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Phagocytosis
Opsonins
106539497
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106539497
Exosomal proteins of colorectal cancer cells
106539497
Exosomal proteins of bladder cancer cells
106539497
Glycosaminoglycan binding proteins [BR:
tsr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106539497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_3
TSP_C
Motif
Other DBs
NCBI-GeneID:
106539497
NCBI-ProteinID:
XP_013909771
UniProt:
A0A6I9X696
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MATTIEARNLNMAAADNVAHRLSALWMPSMGSVLSTSEQPIIRKTDNCVTVPNSGQEDAD
RDGIGDACDDDADGDGIKNSEDNCVFVPNADQQNVDLDNFGDACDNCRNIKNNNQWDSDG
DGWGDLCDNDMDGDKIKNVLDNCPRIPNSDQKDTDGDGVGDVCDSCPFISNPDQKDTDHD
LVGDPCDTNQDKDGDGHQDSRDNCPSVPNSSQLDSDKDGLGDECDDDDDNDGIPDHNPPG
PDNCRLVPNPGQEDTNRDGVGDACQDDFDKDHVVDRIDVCPENAQVTLTDFRAFQTVVLD
PEGDAQIDPNWIVLNQAVKSKTGPGEYLRNSLWHTGDTVDQVKLLWKDPRNVGWKDKTSY
RWFLQHRPQVGYIRTRFYEGSEMVADTGIVLDTTMRGGRLGVFCFSQENIIWSNLRYRCN
DTIPEDYEAYRNQHDY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacaattgaggcgcgaaatttgaatatggctgcagccgacaacgtcgctcac
aggctctccgctctgtggatgccttcaatgggatccgtgctctccacaagcgagcagcca
attatccggaaaacagataactgtgtgacggttcccaactccggccaagaagacgctgac
agggatgggattggtgatgcgtgtgacgatgatgctgatggggacgggataaaaaactcc
gaggacaactgtgtgtttgtgcccaatgcggaccagcaaaacgtggatctagacaacttt
ggggatgcttgtgacaactgccggaatatcaagaacaacaaccagtgggacagcgatggc
gacggatggggagatctgtgcgacaacgatatggatggagacaaaattaaaaatgtcctg
gacaactgtccgaggatcccaaattctgaccagaaggacactgatggggatggagttgga
gacgtctgtgacagctgccccttcatcagtaacccagatcagaaagatactgaccacgat
cttgttggagacccatgtgacaccaaccaggacaaagatggagatgggcaccaggattcc
cgcgacaattgtccttcggtgcccaacagctcccagctggactctgacaaggatgggctt
ggagatgaatgtgatgatgatgatgataatgatggcatcccagatcacaatcccccaggg
cctgacaactgtcgtttggtccccaatcctggccaggaggacacaaaccgagacggtgtt
ggagatgcttgccaggatgactttgataaggaccacgtggttgaccggattgacgtttgc
cctgaaaatgctcaggtgacactgactgacttccgggcctttcaaaccgttgtgttggat
cctgaaggagatgcccagatagaccccaactggattgtcctcaaccaggcggtgaaatca
aagactggtcctggagaatacctgcgtaactcactctggcacacaggggacacagttgac
caggtcaagttgttgtggaaggaccctcggaacgtcggctggaaagataagacttcgtac
cgctggttcttacagcaccggccccaggtgggctacatccggactcggttctatgagggg
tctgagatggtggccgacactggcattgtcctcgacacaaccatgcgagggggccgtctg
ggggtcttctgcttctcccaggaaaacatcatctggtccaacctgcggtatcgctgcaat
gacacgattcctgaagactacgaggcttaccggaaccaacacgactactaa
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