Thamnophis sirtalis (common garter snake): 106556290
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Entry
106556290 CDS
T06107
Symbol
GP1BA
Name
(RefSeq) platelet glycoprotein Ib alpha chain
KO
K06261
platelet glycoprotein Ib alpha chain
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106556290 (GP1BA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tsr04090
]
106556290 (GP1BA)
CD molecules [BR:
tsr04090
]
Proteins
106556290 (GP1BA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
106556290
NCBI-ProteinID:
XP_013930763
UniProt:
A0A6I9Z179
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MNNIEDLLQVSCVEKGLTNIPGGLPEDTGILLLASNQLAKVALASFQHLPLLWKLDLSNN
SLKVLETGATLPKLEKLLLSHNSLESLPAFLGLPNLKRLALGHNRLSQLPEGAFRGLGRL
QDLELQGNQLQSLPVGVFHGLQVLGDLDLSDNRLEALPPQLLDKLEKLAILGLERNRLER
VPQNFFPDNEYAYVHLVENPWLCDCRLDYLREWIKDNEIFVYTRMNVQEEGMDKEVMENE
PEKVLCHGPPQVKGQAVMNFTTVCRKLGDEDPEVEVEGGPAEDSWSPSLTPPPSTPTASR
RSSPSPSTAVSPSGAALTTTSGTPALSSMTTHCPTTSSPGPTTALRPLTTTAAFAAFGLS
TSAATAGKSRATSNGPMTTPGPSTAHTPTSGVPTTMATSSNPPALSPTASMLTTPLPSSA
PPPATTAAGHPPSTAALVPPTPTPTHVQSSARISAPLSTRGFSAPKASAHCLCPILPVRV
LGVAAHQGSKAEWLAGSCCLLRLVLYLACLALVALPTLALLCWLGWLSLGWDRPAVRGAP
GSCLAQTQQWQEASPKGWQLKLAEAPPRRTSGPRIYRVCKTFQVGPSRHVSWLLVSLPGS
AGKWARMQARLSSYSLDRGKDTLGAVRVKYAAASL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatcgaggacctgctgcaggtgagctgtgtggaaaaggggctgaccaacatc
cccggcgggctgccggaggacacaggcatcctgctcctcgcctccaaccagctggccaag
gttgccctggcctccttccagcacctgcctctgctgtggaagctggacctctccaacaac
agcctgaaagtcctagagaccggcgccaccctgcccaaactcgagaagctgcttctgtcc
cataacagcctggagagcctgcccgctttcctggggctgcccaacctgaaacgcttggca
ttggggcacaaccggctctcccagctgcctgagggggccttccgtggcctggggcggctg
caggacctggaattgcagggcaaccagctgcagagcctgcctgtcggagtcttccacggc
ctgcaggtgttgggggatctggacctgtcggacaaccgcctggaagccctgcccccgcag
ctgctggacaagctggagaagctggcgattctggggttggagaggaaccggctggagcgt
gtgccacagaacttcttcccggacaacgagtatgcctacgtccacctggtggagaacccc
tggctgtgcgactgccggctggactacctgcgcgagtggatcaaggataacgagatcttc
gtgtacactcgcatgaacgtgcaggaggagggcatggacaaggaggtgatggagaacgag
cccgagaaagtcctctgccacggacccccccaggtgaagggccaggccgtcatgaatttc
acaaccgtctgcaggaaactcggagacgaggacccggaggtggaagtcgagggaggccct
gcggaggatagctggagtccctctctgacccctcccccttcgacgcccactgcctccagg
cgctcctcgcccagcccaagcacagccgtcagcccaagtggggccgctctcacaaccaca
agcggcactccagcgcttagttctatgacgacacactgccctaccaccagcagccctggt
cccaccactgctctccgtcccctcaccacaaccgcagcctttgccgctttcggcctttcc
accagtgctgccactgcagggaagtcaagggcaacttctaatggccccatgacgacccca
ggaccctcaaccgcccacaccccaacctctggtgtccctaccacaatggcaacctcctcc
aaccctcctgctctcagccccacggcctcaatgctcaccaccccgcttccctcgagtgcc
cctccaccagcaaccacggcagccgggcatcctccgagcactgcagccctggtccctccc
acccccacccccacccatgtccaaagctcagccaggatttctgctcccctttccacccgc
gggttttctgcccccaaggcctctgcccactgtctctgccccatcctgcctgtcagggtt
ctcggagtggctgctcatcaggggtccaaggcagagtggctggctggctcctgctgcctc
ctgcgcctggtgctctaccttgcctgcttggcgttggtggccctgccgaccctggccctg
ctctgctggctgggctggctctctctcggttgggaccgcccggctgtgcgaggagctccg
gggtcctgtctggcccagacccagcagtggcaggaagcctcccccaaaggatggcagctg
aagttggccgaagcccccccacgtcgcacctccgggcctcggatctaccgcgtctgcaag
acgttccaagtgggcccttcccgccacgtctcctggctgctggtcagcctgcctggctct
gccggaaaatgggcccggatgcaggccaggctgtcctcctacagcttggacagagggaag
gacacgctgggggccgtgagggtgaaatacgccgcggcctctttgtaa
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