Trachemys scripta elegans (red-eared slider): 117875571
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Entry
117875571 CDS
T07347
Symbol
OTX1
Name
(RefSeq) homeobox protein OTX1 isoform X1
KO
K09326
homeobox protein OTX1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117875571 (OTX1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117875571 (OTX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
117875571
NCBI-ProteinID:
XP_034622837
LinkDB
All DBs
Position
3:15925225..15931076
Genome browser
AA seq
335 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLTGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGGGAKSRPAKKKPSPARESSG
SESSGQFTPPAVSSSGSSSSSSSSSSGSAAAALGNPAAATASISAPASSIWSPASISPGA
APSAVSVPEPLPPGGASCMQRSVAGASSASYPMSYGQGGGYGQGYPAAPSSSYFGGVECS
SYLAPMHSHHHPHQLSPMAPSSMAGHHHHPLGQGSGHHHHHHHHHQGYGSTGLAFNSPDC
LDYKEPGAASSWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacagcccccctatggcatgaatgggctggggctgaccggaccg
gctatggacttactgcacccctccgtgggctatccggccacccctcggaagcagcggcgg
gagcgcaccaccttcacccgctcgcaactcgatgtgctggaggcgctcttcgccaagacc
cgctacccggacatcttcatgcgagaggaggtggcgctgaagatcaacctgcccgagtcc
agagtccaggtctggttcaagaaccgtcgggccaagtgccggcagcagcagcagagcggc
ggcggggccaagagccggccggccaagaagaagccgtccccggcgcgggagagctcgggc
tcggagagcagcggccagttcacgccccccgccgtctccagctccggctcgtcgtcctcc
tccagctccagctcctccggcagcgcggcggcggcgctgggcaaccccgcggcggcgacc
gcctccatcagcgccccggcctcgtccatctggagcccggcctccatctccccgggcgcc
gcgccctcggccgtgtcggtgccggagccgctgccgcccggcggcgcgtcctgcatgcag
cgctcggtggccggcgcctcctccgcctcctaccccatgtcctacggccaaggtggcggc
tacggccagggctacccggcggccccctcctcctcctacttcggcggcgtggagtgcagc
tcctacctggcgcccatgcactcccaccaccacccgcaccagctcagccccatggcgccc
tcctccatggccggccaccaccaccacccgctgggccagggctccggccaccaccaccac
caccatcaccaccaccagggctacggcagcacggggctggccttcaactcccccgactgc
ctggactacaaggagcccggcgccgcctcctcctggaaactcaacttcaactcccccgac
tgcctggactacaaggaccaggcctcctggaggttccaggtcttgtag
DBGET
integrated database retrieval system
