Treponema succinifaciens: Tresu_0485
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Entry
Tresu_0485 CDS
T01461
Name
(GenBank) alpha amylase catalytic region
Organism
tsu
Treponema succinifaciens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AEB13435
UniProt:
F2NXW5
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Position
533629..537273
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AA seq
1214 aa
AA seq
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MKISYNEFHISRKVREECDFEDSLFSSAGNVIFANFKAVHKFQTKLNGLFDKRGQSEKKV
SAGSLNAMGLIDEIFHYVCMIYRRDKAPDCFKNLLSDLDRNFSKVKIDKLLLQFMEEFPP
VNVFKKEISAEEFLEQNCIDAGTKMKRSNREQVLEELVMLHLANENPAFHPFAILFDDSN
LVVNADYIKTWNQIKAFFLTQPVFGPKNNSLINMLKEPVVASPTSLKGQLDYIRTYWSDV
LGEWIRRLLEGIDTISEEEKAAWHPTNGGEVSMEAYTYDEENLMKEYERFSPDREWMPKV
VLMAKTVLVWLYQLSKKYNRDISRLDQIPDEELDALRDEGFTGLWLIGLWERSYASKRIK
QINGNPEAAASAYSLLDYEIAGNLGGWQALENLRYRCWIRGIRLASDMVPNHTGMDGTWV
TEHPDYFITTKECPFPGYTFNGENLSRDGRVSIYLEDHYYSKSDCAVCFKRVDNATGDVT
YIYHGNDGTGMPWNDTAQIDFLNPVAREAVMQQILKVARNFPIIRFDAAMVLAKKHIRRL
WYPEPGHGGDIASRSRYALTSAEFEKRIPNEFWREVVDRCAQEMPDTLLLAEAFWMMEGY
FTRTLGMHRVYNSAFMNMLKKEENQKYRDTVKNTIKFDPQILKRFVNFMNNPDEETAVAQ
FGKGDKYFGVCTLMITMPGLPMFGHGQLEGFEEKYGMEYTKAYKDEKVDQDLMNRHWHDI
FPLMHKRYLFAPVENFLFYDVWNNGTVNENIFAYSNVVGNERTIVFYNNKYERAQGWIKQ
SCEYAVKTGSDENDKVMVSKSLAESMGFTYGYNHYVIFREHRSGLWFVRRSDDLINNGMF
VALNGFEYQVYLDVQQVVDGTDGKYFKLNELLNGSGVPDLEIAWQEFRYKDLFAALKNFV
TKEFMQDIHALFSSDSSKEFKLENKEPTSLKKVLKSAKEAALAYYEKENEFALEEEKLAS
ENYKKKAKSKKSESSLEPEQKFRAFEKCVEYLYEAYSAPEDEDSANNLELEISSGIKSNE
FSAEILCAFAAVASAGGENCKKWGYSRKLSEIIESAGFFNSEMRNNFIRIFESMKISSLN
FGTSGFVKSTYTVAKSLVDSENSFVLTGANEYNGVRWFNKEKMDATLWYAFASNCMTSKR
ILREQIFRLYRTLFASKELAEYKCEQFTEAVKPVKMPAPKTEKAKAKKSSVEKTDAKKPA
AKKTKKDSKSSKSK
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttcttacaatgaatttcacatcagccggaaagtaagagaagaatgcgatttt
gaagattcgcttttttcttctgccggaaatgttatttttgcaaacttcaaggctgtgcat
aaatttcagacaaaactgaacgggctttttgataaacgcggtcaaagtgaaaaaaaagtt
tcagcaggttctttgaacgcaatgggacttatcgatgaaatttttcattacgtctgcatg
atttatagaagagacaaagctccggattgctttaaaaatcttctttctgacttggacaga
aatttttcaaaagtaaaaattgacaaattgcttttgcagttcatggaagagtttcctcct
gttaatgtatttaaaaaggaaatttctgcggaagagtttttagagcagaactgtattgat
gccggcacaaaaatgaaacgctcaaaccgcgagcaggttttggaggaacttgtgatgctt
catcttgcaaatgaaaatccggcgtttcatccgtttgcaattttgtttgacgattcaaat
cttgttgtcaacgctgactacattaaaacttggaatcagattaaggcattctttttgact
cagcctgtatttggtcctaagaacaattcgcttataaatatgcttaaagagcctgttgtt
gcttctccgacttctttaaaaggccagttggattatatacgcacttattggagtgatgtt
cttggcgaatggattcgtcgtcttcttgagggaatcgatacaatttccgaggaagaaaaa
gctgcctggcatcctacaaacggcggcgaagtttccatggaagcctacacttatgatgaa
gaaaatctgatgaaagaatacgagaggttcagtcctgaccgtgaatggatgccgaaagtt
gttttgatggcaaagactgttcttgtatggctttatcagctttctaaaaaatataaccgc
gatatttcacgccttgaccagattccagatgaagaacttgatgctttgcgcgatgagggg
tttacggggctttggcttattggactttgggagcgcagttatgcttcaaaaagaatcaag
cagataaacggaaatccagaggcggccgcttcagcatattctttgctcgactatgaaatt
gcaggaaatcttggcggatggcaggctttggaaaatcttcgctacagatgttggatccgc
ggaatccgccttgcaagcgacatggttccaaaccacactggaatggacggaacttgggtt
acggaacatcctgattattttataacaacaaaggaatgtccattcccaggttacactttc
aatggagaaaacttgagtcgcgatggccgtgtttcaatttatcttgaagaccattactat
tcaaaaagcgactgcgcggtttgctttaagcgtgtagacaatgcgacaggcgatgtaact
tacatttaccacggaaacgatggaactggaatgccttggaatgacacagcccaaattgac
tttctgaatccagtcgcgcgcgaagccgttatgcagcagattttaaaagttgcccggaac
ttcccgattatcaggtttgatgccgcaatggttcttgcaaaaaaacatatccgccgcctt
tggtatcctgagccaggacacggaggagacattgcaagccgcagccgttatgctttgact
tccgcagaatttgaaaaacgcattccaaatgaattctggcgcgaagttgttgaccgttgc
gctcaggaaatgcctgacacacttttgcttgctgaagctttctggatgatggaaggatat
tttacacgtactcttggaatgcaccgtgtttataattccgcctttatgaatatgctcaaa
aaggaagaaaatcagaagtaccgcgacactgtaaaaaatacaataaaatttgatccgcag
attctaaagcgttttgtaaactttatgaacaacccggacgaagaaacagctgtggctcaa
ttcggaaaaggcgacaagtattttggagtctgcacactgatgattacgatgcctggactt
cctatgttcggacacggtcagcttgaaggatttgaagaaaaatatggaatggaatacacc
aaggcctacaaagatgagaaggttgatcaggatttgatgaatcgccattggcatgatatt
ttccctctaatgcacaagcgttatctttttgcgcctgttgaaaactttttgttctatgat
gtctggaataatggaactgtaaacgaaaatatttttgcttactcaaatgtcgtaggcaac
gagcgcacaattgttttctataataacaagtatgaacgcgcccagggctggataaagcag
tcatgcgagtacgctgtaaaaactgggtctgacgaaaatgacaaagtgatggtttcaaag
tctttggctgaaagcatgggattcacttatggctataatcactatgtgattttccgtgag
catagaagcggactttggtttgtgcgcagaagcgatgacttgattaacaacggaatgttc
gttgctcttaacggctttgaatatcaggtttatcttgatgttcagcaagttgttgacggc
acggacggaaaatactttaaacttaatgagcttttgaacggttctggtgttcctgatctt
gaaattgcatggcaggaattccgctacaaggatttgtttgccgctcttaaaaatttcgtt
acaaaagagtttatgcaggatattcacgccttgttctctagcgattcttcaaaagaattc
aagcttgaaaacaaagagccaacgtcgctcaaaaaagttctaaagtctgcaaaagaagct
gctcttgcttattacgaaaaagaaaacgagtttgcgcttgaagaagaaaaacttgcgtct
gaaaattacaagaaaaaagcaaagtcaaagaaatctgaatcatctcttgagcctgagcag
aaattcagggcatttgagaagtgcgttgaatatttgtatgaggcttattctgcgccggaa
gatgaagattcagcaaacaaccttgagcttgagatttcttctggaatcaagtcgaatgaa
ttcagtgcggaaattctatgcgcctttgcagcagttgcttccgctggcggtgaaaactgc
aagaagtggggctacagccgcaaactttccgagataatcgaaagcgcaggcttcttcaat
tcagaaatgagaaacaactttatccgcatttttgaaagcatgaagataagcagcctgaac
tttggaacttctggatttgtaaagtcgacatacactgtggcaaaatcgcttgtggattct
gaaaattcatttgttcttactggtgcaaatgaatacaacggagttcgctggttcaacaag
gaaaaaatggatgccacactttggtatgcgtttgcttccaactgcatgacaagcaaaaga
atccttcgcgagcagattttcaggctttacagaactttgtttgcttcaaaggaacttgct
gaatacaagtgcgagcagtttacagaagccgtaaagcccgtgaagatgccagctccaaaa
acagagaaggcaaaagcaaaaaaatcttccgtggaaaaaactgatgctaaaaagccggct
gctaaaaaaactaaaaaagattcaaagagttcaaaatcgaaataa
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