Caldanaerobacter subterraneus subsp. tengcongensis: TTE2311
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Entry
TTE2311 CDS
T00081
Symbol
RpoE6
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs
KO
K27000
RNA polymerase sigma-H factor
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tte03021
]
TTE2311 (RpoE6)
Transcription machinery [BR:
tte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TTE2311 (RpoE6)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
HTH_23
GerE
HTH_30
Lebercilin
HTH_38
HTH_36
Sigma70_ECF
HTH_29
DUF3232
DUF1676
Motif
Other DBs
NCBI-ProteinID:
AAM25452
UniProt:
Q8R7T7
LinkDB
All DBs
Position
complement(2193222..2193881)
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AA seq
219 aa
AA seq
DB search
MGAVLVKSGAQQDYYQAYEQMEEEEIVSRAQQGDELALEYLIERYKNFVKAKARTYFLVG
ADKEDIIQEGMIGLYKAIRDYKNNKLTSFKAFAELCVTRQIITAIKTATRQKHIPLNSYV
SLNKPIFDEESDRTLMDVVSTQCIADPEELIISKEEYVNIENKMEELLSGLEWEVLVAYL
DGKSYQEIAEDLNRHVKSIDNALQRVKRKLERYLEMRNS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggtattagtgaaatctggggcgcaacaggattactatcaggcttatgagcaa
atggaggaggaggagatagtttcaagagcgcaacagggtgatgagctggctttagagtat
ctcattgagaggtataagaattttgttaaggctaaagctcgcacttattttttagttgga
gctgataaagaagacataattcaagaaggaatgataggactttataaagctataagggat
tataaaaacaacaagctcacttctttcaaggcttttgcagagctatgtgtgacccgtcag
attattactgccattaaaaccgctaccaggcaaaagcacattccacttaattcttacgtc
tccctgaataaacccatctttgatgaagaatctgacaggactctgatggatgtagtttct
acccagtgcattgctgaccctgaggaattaataataagcaaagaggaatacgttaacatt
gaaaacaagatggaggaacttttaagcggtttagaatgggaggtcttggtggcatacctg
gatgggaagtcttatcaggaaatagctgaggatttaaacaggcatgtgaagtccatagac
aatgccttgcagagggtgaaaagaaaattagaaagatatcttgaaatgaggaacagctag
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