Thioalkalivibrio paradoxus: THITH_13785 Help Entry THITH_13785       CDS       T03590                                  Name (GenBank) CRISPR-associated protein Cas3   KO K07012   CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] Organism tti  Thioalkalivibrio paradoxus Brite KEGG Orthology (KO) [BR:tti00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02048 Prokaryotic defense system [BR:tti02048]     THITH_13785 Enzymes [BR:tti01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      THITH_13785 Prokaryotic defense system [BR:tti02048]  CRISPR-Cas system   Type I CRISPR-Cas system    Type I signiture cas proteins     THITH_13785 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cas3_I-F_Cas2 Cas3-like_C Cas3_HD DEAD Motif Other DBs NCBI-ProteinID:  AHE99155 UniProt:  W0DQN4 LinkDB All DBs Position complement(2987053..2990409) Genome browser AA seq 1118 aa AA seqDB search MNVLLVSQCNKNALKETRRILDQFAERRGERTWQTSITQAGLDMLRKLLRQSARRNTAVA CHWIRGRDRSELLWIVGNASRFNLRGAVPTNTTARDVLRRGDENDWHTGEDIRLLSSLAA LLHDLGKACVAFQRRLIAEGKLGRNQYRHEWISLRLFQAFVGNDDDRGWLERLKDLPADD DQAWTAALLKDGLVEGLESPFRTLPPLAAAVGWLVLTHHRLPLLPGDKGRPTGSITGFRA ERLTGLPEIITPNWNECPSETAPKELQPYWRFDHPLPVVTAKWRARARNLAERLLGRLPS MPAAWLDNPYVMHLARMSLMLADHHYSSLTYPKDRVKGEPGYGLYANTNRATRQLNQPLD EHLIGVEAIARAITRSLPGIERHLPRLARHKGFRKRTADPRFQWQNSVFDLAASLRERTT AQGFFGVNMASTGRGKTLANGRILYALANPEQGTRFSIALGLRTLTLQTGQAFRELMHLG DDELAIRVGGTANRILFEHFEEQAERHGSASAQDLMDEDGHVFYEGDFGNHPVLKHLRHD PAIRSLIAAPILACTVDHLTPATESVRGGRQIAPMLRLMSSDLVLDEIDDFPLEDLPALT RLVHWAGMLGSRVLLSSATLAPALVEGLFLAYREGRAEFQRNRGEPGQPVNIVCAWFDEY GKLAQDCADGPELAAAHGRFVQGRQKHLATEQPRRSAELAPLPISRTGSQEEIRQEYARQ LRGHALELHRRHCSVDPASGKRVSFGLIRMANIEPLIAVAQTLFRDGAPEGHRFHLCVYH SRFPLLMRSEIERNLDRILNRKHPEAVFELPVVRHRIDAAPEPDQLFIVIGSPVTEVGRD HDYDWAVVEPSSMRSIIQLAGRVRRHREPTDKGPNLVLPNFNLKALERRGQPAYCRPGFE SEEWMLRSHDLGELLRPEEYATIDSRPRIIEPQPLEPAKRLVDLEHARLRDTLLPRESAQ KTLSPRELRAMKSPPTPRLNAASWYQLPRATLSGTLQKVQRFRDQTGQNEVDLVLMPDEA EEEWVLQKIHREPGSRGQSVYIDVEKSLMQRHNLEAVIGPRAGAWITRPYMDALADLAEQ LDMPLEHCARRFGTVSVPERDNGWSYHDALGFASRGSG NT seq 3357 nt NT seq  +upstreamnt  +downstreamnt gtgaacgttctcctcgtttctcagtgcaacaagaacgcactcaaggagacgcgccgcata ctggaccagttcgccgagcggcgcggagaacgcacctggcagacctcgattacccaggcc ggtctggacatgctccgaaagctgctgcgccagtccgcgcggcgcaacacggcggtggcc tgtcactggatacgcggtcgtgatcgcagcgagttgctctggattgtcggcaatgccagc cgattcaacttgcgtggtgcggtacccacgaataccaccgcacgcgatgtgctgcgtcgc ggcgacgaaaacgactggcataccggcgaggatatccggctgctgagcagcctggccgct ctgctgcacgatctcggcaaggcgtgcgttgcgttccagcggcgcctgatcgcggaaggg aagctcggccggaaccaataccgccacgaatggatcagtctgcgcctgttccaggccttt gttggcaacgacgatgatcgtggctggctggaacggctgaaggatcttcccgccgatgac gatcaggcatggaccgctgcactcctgaaggatggcctggtcgaagggctcgaatcacca ttccggacactaccgccactcgcggccgcagtgggttggctggtcctgactcatcaccgg ctaccattgctgcccggcgataaaggtcgccccacaggaagcatcaccggctttcgggcc gagcggctcacggggttgcccgagatcattacgccgaattggaatgaatgccccagcgaa accgcacccaaagagctgcagccgtattggcggttcgatcaccctctgcccgtagtcact gccaagtggcgcgctcgcgcccgcaacctggcggagcggctcctggggcgactgcccagc atgccggctgcctggctcgacaatccatacgtgatgcacctggcgcgcatgagcctgatg ctggccgaccaccactattccagcctcacctaccccaaggatcgagtgaagggcgaaccc ggatacggtttgtatgccaacacgaaccgagcgacccgacaactgaaccaacccctcgat gaacatctgatcggcgtcgaggccatcgcgcgtgccattacccgttccctgccggggatt gagcgacatctcccgcgcctcgcccgtcacaagggattccgcaagcgtacggcggacccg cgcttccagtggcagaacagcgttttcgatctcgccgcgtcgctgcgcgaacgcacgacc gcccaggggtttttcggggtgaacatggcttcgaccggaagagggaagaccctcgccaac ggtcgcatcctgtatgccctggccaatccggaacagggcacccgcttttccatcgcgctg ggtctgcgaacgctgaccttgcagaccgggcaggctttccgggagttgatgcacctcggg gacgacgaactcgccatccgggtcggcggtaccgccaaccgcatcctcttcgagcacttc gaggaacaggcggagcgccacggctcggcgtcagcacaggacctcatggacgaggacgga cacgtcttctacgaaggtgacttcggcaaccatccggttctgaagcacctgcggcacgac ccggcgatacgctcactgatcgccgccccgatcctcgcttgcaccgtcgatcacctgact ccggccaccgagagcgtgcgcggtgggcggcagatcgcacccatgctgcgcttgatgagc agtgatctggtactggacgagatcgacgactttcctctggaggatttgccagcactcacc cgcctggtgcactgggcgggcatgctcggttcacgggttctgttgtcctcggcaacgctg gcgccggcgctggtggaaggcttgtttctggcctaccgggaaggccgcgccgaattccag cgcaaccgtggcgagccgggccagccggtcaacatcgtctgcgcgtggttcgatgaatac ggaaagctggcgcaagactgcgcggacggccccgagcttgcggcagcacacgggcggttt gtgcaaggccgccagaaacacctggcgacggagcagcctcggcgcagtgccgaactggct ccgctacccatctcccgcactgggtcgcaggaagaaatccggcaggaatacgcccggcag ctacgcggccatgcactggaactgcaccgacggcattgcagcgtggaccccgcaagcggg aaacgggtcagtttcggcctgatccgcatggccaatatcgagccgctgattgccgtcgcg caaaccctgtttcgggacggcgccccggagggacatcgctttcacctttgcgtgtatcac tcccgtttcccgctgctgatgcgctcggagatcgaacggaacctggaccgaatcctcaac cggaagcatcccgaggcggtattcgaactgcccgttgtccgccatcgtatcgatgccgcg ccggagccggaccagttgttcatcgtgatcggctcccccgtgaccgaggtcgggcgcgac cacgactacgactgggcggtcgtcgaaccttcgtcgatgcgctcgatcatccagcttgcc ggtcgcgtccggcggcaccgcgaaccgaccgacaagggtcccaacctcgtcctgccgaac ttcaacctgaaagcgcttgaacggcgtggccagcccgcatactgccgccccggattcgag agtgaggaatggatgctccgcagccatgatcttggcgaacttctccgcccggaggaatac gccactatcgattcgcggccccggatcatcgaaccgcagcccctcgagccggcgaaacgt ctggtggatctggaacacgcccgcctgcgcgataccttgttgccccgagagtctgcccag aaaaccctttctccgcgcgaactccgggccatgaaatcgccaccgactccgcgcctgaac gcggcctcgtggtatcagcttccgcgcgcgacgctaagcggcaccttgcagaaagtgcag cgatttcgcgatcaaaccggccagaacgaagtcgatctcgtcctgatgccggacgaagcg gaagaagagtgggtgctgcagaaaatccaccgggaacccggtagccggggccaatcggtc tacatcgacgtcgagaaaagcctcatgcagcgccataacctcgaggccgtaatcgggcct cgtgcaggcgcatggattacccgcccgtacatggatgcgctggccgatctcgccgagcaa ttggacatgccgctggagcactgtgcccgccgcttcggcaccgtgtcggtgccggagcgc gataacggctggagctaccacgacgcgctggggtttgcgtcacgcggatcggggtaa

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