Thermoproteus tenax: TTX_0869
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Entry
TTX_0869 CDS
T01641
Symbol
pcnaB
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
ttn
Thermoproteus tenax
Pathway
ttn03030
DNA replication
ttn03410
Base excision repair
ttn03420
Nucleotide excision repair
ttn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ttn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TTX_0869 (pcnaB)
03410 Base excision repair
TTX_0869 (pcnaB)
03420 Nucleotide excision repair
TTX_0869 (pcnaB)
03430 Mismatch repair
TTX_0869 (pcnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttn03032
]
TTX_0869 (pcnaB)
03400 DNA repair and recombination proteins [BR:
ttn03400
]
TTX_0869 (pcnaB)
DNA replication proteins [BR:
ttn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
TTX_0869 (pcnaB)
DNA repair and recombination proteins [BR:
ttn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
TTX_0869 (pcnaB)
MMR (mismatch excision repair)
Other MMR factors
TTX_0869 (pcnaB)
TLS (translesion DNA synthesis) factors
Other TLS factors
TTX_0869 (pcnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
NUMOD4
MAGI_u1
YpM
Motif
Other DBs
NCBI-ProteinID:
CCC81523
UniProt:
G4RPM8
LinkDB
All DBs
Position
complement(753663..754439)
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AA seq
258 aa
AA seq
DB search
MSLAARAVFPKGKDPRYTFEALISMLPEITMSFTTDGITMKALDPSKVALLQLEYTAGGL
EEYSVEHDVKIGLILSTVKDAIKRVGATEKLEIGVDEERRKFALTVYPKRGRESGIVRRF
YFPIVQLAEEEVPEINVEYDASFTMDSSEFDDAMALMEQVSDMVVVKVTPSSVAFVSQGE
GGREASTEFDQNSEGLYEVSSQGTVSAKYTVELIRNISGKLKGVSKRVKVELGDMKPLKL
TYEFSSGVFTMILAPRTD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgcggctcgcgccgtgtttcccaagggcaaggatccgcgttatacttttgag
gcgttaatctccatgttgcccgagatcactatgtcgttcacgacagacggcataacgatg
aaggcgttggatcccagcaaggtcgccttgttgcaacttgagtatactgcaggcgggttg
gaggaatactccgttgagcacgacgtcaagatagggttgatactatccacggtgaaggat
gcgatcaagagggtgggcgccactgagaaactggagatcggggtcgatgaggaaaggcgg
aagttcgcgcttacggtctatccaaagaggggcagagagtcgggcatagtcaggcggttc
tacttccccatcgtgcagctggctgaggaggaggtgcctgagataaacgtggaatatgac
gcgtccttcacaatggactcctcggagtttgacgacgcaatggccctcatggaacaagtc
tccgacatggtcgtagttaaagtgacgccctcctcagttgcgttcgtctcacaaggggaa
ggagggagggaggcctctacggagttcgaccaaaacagcgagggcctctacgaggtcagc
tctcagggcacagtatctgcgaaatacactgtggagctcataagaaacatatcggggaag
ctaaagggcgtaagcaaaagggtcaaggtagagttgggcgacatgaagcctctgaagcta
acatacgaattctcaagcggcgtcttcacaatgatcttggctcctcgcaccgattaa
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integrated database retrieval system
