Thermobaculum terrenum: Tter_1074
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Entry
Tter_1074 CDS
T01134
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ttr
Thermobaculum terrenum
Pathway
ttr03030
DNA replication
ttr03430
Mismatch repair
ttr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tter_1074
03430 Mismatch repair
Tter_1074
03440 Homologous recombination
Tter_1074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttr03032
]
Tter_1074
03400 DNA repair and recombination proteins [BR:
ttr03400
]
Tter_1074
Enzymes [BR:
ttr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tter_1074
DNA replication proteins [BR:
ttr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tter_1074
DNA repair and recombination proteins [BR:
ttr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tter_1074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ACZ41990
UniProt:
D1CB25
LinkDB
All DBs
Position
1:1153718..1157260
Genome browser
AA seq
1180 aa
AA seq
DB search
MSSDFVHLHLHSDYSLLDGLGKIKDYVSLAKAYGMKAIALTDHGVMYGAIEMYTEALEAG
IKPIIGCELYVAPRSRHDREKRLDSDYAHLLVLAKDYEGYQNLIKLVSYAFLEGYYYKPR
IDHELLAKYSKGLIVTSSCIGGEVPQLLLQGKDKEARELADKYRSIVGRENYFIELQDHP
FEEQRIANTKLIELAKDLEIPLVATCDVHYPRQEDAAIQDILLCVQTGKQVTDKNRMRMS
SDTNYMRSPQEMEQAFRDYPEAIKNTALIAEMCNLQIPMGKWILPHFDVPEGYDLQSYLR
YLCEEGLRQKYSEVTQEIRDRLEYELDVINTKGYTAYMLIVQDFVNWARSRGIAVTSRGS
AAGSLVSYLLNITTADPIEYKLPFERFLTIHRPSPPDIDMDFEDKRREEVIEYVTSKYGE
ENVAQIITFGTMEARAAVRDVGRALGISYSDTDTIAKMIQPGWSIKEALENSLALRQWYE
RDERIKQLIDVASKLEGVTRHASTHAAGVIISREPIINYAPLQKDKNGSRPLVQFDMRMC
EKIGLLKMDFLGLANLSILGRAVKTIKQTRGIDIELDKLPLDDTKTYELLSSGETTGVFQ
LESAGMRRYIKELKPSNIRDVAAMIALYRPGPMDMIPTYIARKHGREPVEYLVPGLEPIL
KDSYGVLVYQDDILLIAIEIAGYTWEEADKLRKAVGKKIREELEAQRDKFIKGCQEHGGL
SPEKARELWDWMEPFARYGFNKAHAAAYSLVAYQTAYLKANYPSEYMSSLLTVGMDNSEK
VASGIVECNRMGIRVLPPSVNDSFEEFTLEPQSQRPGEPIPIRFGLGAVKNVGSGPISAI
VSARESLPDKRFKSFEHFCTVVDFKQINKRALESLIKAGAFDEFGHRSQLLAAIDEAIAL
NQKMQRASDLGQFSLFGDAFSSQDHLPSLTLPEVDEAPKEQLLAWEKEMLGLYLSEHPLN
AVLGKRRLDSTSLISEISEEMVGQTVRVAAMLVNPQIRTTKRQQEMLIGKLEDQTSSIDF
VVFPEQYEKYRDLLVSDAVLLVTGKLDERQESFQIVCESVAKIDGNSEDEISQEVESLIE
EDSPHPESARAYEIRIRFPVSDDIEVDIERMQALYKLLRSHPGDDKVLIQLPVGSRFVVI
EPTNLEVSFSAVLEQDLEKVLGSRCWRLYVNNKGDRVQVA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgagcgattttgtacaccttcatcttcactctgactattcccttctagatggtttg
ggaaagatcaaggattacgtaagtcttgccaaagcatatggtatgaaagctattgctctg
accgatcatggcgtcatgtatggcgccattgagatgtacaccgaggccttggaggcagga
ataaagcctatcataggttgtgagctttacgtcgctcccaggtctaggcatgatcgagag
aaaaggctagattcggattatgctcatctccttgttttagccaaggattatgaagggtat
caaaaccttatcaaacttgtttcttatgctttccttgaagggtattactacaaacctagg
atagatcacgagcttttggctaagtactccaaaggtctaatagttacatcatcctgtatt
ggtggagaagttccacaactattgcttcaaggaaaggataaggaggcaagggaactagct
gacaaatacagatccatagtcggtcgtgagaactacttcatcgagttacaggatcaccct
tttgaagagcaacgtatagctaacactaagcttatagagcttgccaaggacctggaaatt
cctctagtagctacctgtgacgtgcactatccacggcaggaagatgctgctatccaggat
atattgctgtgcgtgcaaacaggtaagcaggttaccgacaagaaccgcatgaggatgagt
agtgatactaactatatgcgctctcctcaggaaatggagcaagccttcagggattatccg
gaagcaatcaagaataccgctctaatagccgagatgtgtaacctgcaaatcccgatgggt
aagtggattttgcctcactttgatgtccccgagggttacgaccttcagtcctatctaaga
tatctgtgcgaggagggactcaggcaaaagtattcagaggtgacgcaggaaattcgcgac
agactcgaatacgagctcgatgtaattaacaccaagggatatactgcctacatgttgatt
gtgcaggattttgtaaactgggccagaagtagaggaatagctgttacgagccgaggctca
gctgctggaagcctggtttcttatcttcttaacataactactgcagatcctatagaatac
aagcttccttttgaaaggttccttaccatacatagacccagccctcccgatattgatatg
gacttcgaggataaaagaagggaggaagtaatagagtatgttacctccaagtatggtgaa
gagaacgtagcgcaaatcatcaccttcggtacaatggaagctcgtgctgctgtccgagat
gtgggtagagctttgggtatcagctatagcgatacagatactatagcgaaaatgatccaa
ccagggtggtccataaaggaagctctggagaactctttggcactaaggcagtggtacgag
cgagatgagaggataaagcaacttatagacgtagcttccaagctggagggtgtaacaaga
catgcctctacccatgctgccggggttattatttcgcgcgaaccgatcataaattatgcc
ccgcttcagaaggataagaacggctccaggcctctcgtgcagttcgatatgcgtatgtgt
gaaaagataggattgctcaagatggacttcttagggctggccaacctatcgatcctgggt
agagctgtcaaaaccattaagcagactcgaggcatagatatcgagcttgacaagctgcct
ctagacgatactaagacttatgaattgctttcctccggcgaaaccactggtgttttccaa
ctagagtctgcaggcatgaggagatacatcaaagaactcaagccttccaatatacgggac
gtagcagctatgatagccctctatcgtcctggccctatggatatgatacctacatatatc
gcacgtaagcatggcagggaacccgttgaatatctagtccctggattggaacctattctt
aaggattcatacggtgtacttgtataccaggatgacatactgctaattgcaatagagata
gccggttacacctgggaagaagctgacaagcttagaaaagctgttggtaagaagatacgt
gaagaattggaggctcagagggataaatttataaaggggtgccaagaacatggggggttg
tctccagaaaaagctcgagaactatgggactggatggaaccatttgctaggtatggcttt
aacaaggctcatgctgcagcttactccctagtggcctatcagacagcgtatctgaaggcg
aattatccctccgagtatatgtcctcactgctcacagtgggtatggataactcagagaag
gttgcctctggaatagttgaatgcaacaggatgggcataagggtacttccaccaagtgtg
aatgatagctttgaggagttcacgcttgaaccgcagtcacagcgcccgggcgaacctata
cccataaggtttggcctgggggcagtgaagaacgttgggtcgggtcctatcagtgccatt
gtgagcgctagggagtcgctaccagacaagcgcttcaagtctttcgaacatttttgcacg
gttgttgacttcaagcaaatcaacaaaagagcactggaaagtcttattaaagccggagcc
tttgacgagtttggtcatagaagccaacttcttgcggcaattgacgaggcaatagccctg
aatcagaagatgcagcgtgcatcagatctcggacagttcagcttgtttggagatgctttt
tcatctcaagatcacttgccgtctctaaccctgcccgaagttgatgaagctcccaaggag
caactgcttgcttgggaaaaggagatgcttggtctctacctcagtgagcatccccttaac
gctgtgctcggcaagagacgcctagatagtacctctcttatctccgagatttccgaagaa
atggtaggccagaccgtgcgagtagctgctatgctggtgaatccgcaaatcaggacgaca
aaaaggcaacaagagatgcttataggtaagttagaggaccaaacctctagtatagatttt
gtggttttccccgaacaatatgaaaagtatagagatttactagttagcgatgccgtgctt
cttgtaacaggcaagctagatgagagacaggaaagcttccagattgtatgtgaatctgtg
gcgaagatagatggtaactctgaagatgagatatcgcaggaggtagaatctctaattgag
gaggattctccgcatccagaaagcgccagagcttacgagatacgaatacgcttcccagtg
tccgatgatattgaggtggatatagaaaggatgcaagctctttataagctacttagatct
caccctggtgacgataaagtcctgattcagcttccagtaggttctaggttcgtggtcatc
gaacccacgaacctagaagtatcatttagtgctgtactagaacaggatctggagaaagtc
ttaggttccagatgttggcgactgtatgtgaacaataagggcgatagagtacaggtagcc
taa
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