Thermothielavioides terrestris: THITE_2114852
Help
Entry
THITE_2114852 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12877
protein mago nashi
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03013
Nucleocytoplasmic transport
ttt03015
mRNA surveillance pathway
ttt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
THITE_2114852
09122 Translation
03013 Nucleocytoplasmic transport
THITE_2114852
03015 mRNA surveillance pathway
THITE_2114852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2114852
03041 Spliceosome [BR:
ttt03041
]
THITE_2114852
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
THITE_2114852
Spliceosome [BR:
ttt03041
]
Complex C
Other components
EJC/TREX
THITE_2114852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
FlbT
Motif
Other DBs
NCBI-GeneID:
11521033
NCBI-ProteinID:
XP_003652970
JGI:
Thite2_2114852
UniProt:
G2R250
LinkDB
All DBs
Position
2:join(6405979..6406016,6406070..6406107,6406181..6406276,6406344..6406407,6406461..6406548,6406606..6406746)
Genome browser
AA seq
154 aa
AA seq
DB search
MSNLNEPFYLRYYSGHQGRFGHEFLEFDFRVVGDGRSATARYANNSNYRNDSLIRKEMFV
SSLVVDEIKRIIRESEIMKEDDAKWPTKNKDGRQELEIRLGNDHISFETAKIGSINDVTE
SADPEGLRVFYYLVQDLKALVFSLISLHFKIKPI
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctgaacgagcccttctatttgcgctactattcgggccaccagggccgcttc
ggacacgagtttctcgagttcgactttcgcgtggtgggagatgggcgcagtgccactgcc
cgctatgccaacaactccaactacagaaacgacagcctgatccggaaagagatgtttgtc
agctctcttgttgtcgacgagatcaagcgtattatcagggagagcgagattatgaaggaa
gatgatgcaaaatggcccactaagaacaaggacgggaggcaagaactggagatccggctc
ggcaacgatcacatatctttcgagacggctaagatcggctcgatcaacgacgtgacggag
tcggccgacccggaaggtcttcgggtcttttactatctcgtccaggatctcaaggcgctg
gtattcagcctcatctcgttgcattttaagatcaagcccatctga
DBGET
integrated database retrieval system
