Tenuifilum thalassicum: FHG85_09405
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Entry
FHG85_09405 CDS
T06728
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ttz
Tenuifilum thalassicum
Pathway
ttz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHG85_09405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttz03019
]
FHG85_09405
03400 DNA repair and recombination proteins [BR:
ttz03400
]
FHG85_09405
Enzymes [BR:
ttz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FHG85_09405
Messenger RNA biogenesis [BR:
ttz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FHG85_09405
DNA repair and recombination proteins [BR:
ttz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FHG85_09405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
KGK
TFIIE_beta
Motif
Other DBs
NCBI-ProteinID:
QKG80471
UniProt:
A0A7D3XWJ9
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All DBs
Position
2243836..2245743
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AA seq
635 aa
AA seq
DB search
MGKFEEILRKYWGYNSFRSIQLDIIESVYSGTDTLALMPTGGGKSITFQVPALAMEGICI
VVSPLIALMKDQVENLKKRGINAIAIYSGMSQHEIDIALDNCAYGDVKFLYVSPERLSTP
IFRERVRKMNVCMVAIDEAHCISQWGYDFRPSYLNISELRDYIPENVPFLAVTATATPDV
AKDIQDKLRFRDGRVFRMDFSRENLVYLVRNVEDKEKYLFKIVENVPGSGVIYVRNRKKT
KDVALMLQREGQSADFYHAGLSMEMRNAKQNDWQTGKTRIIVATNAFGMGIDKPDVRFVI
HMDLPDSPEAYFQEAGRAGRDGKLAYAILLYNESDSLKIEQRINTSFPPPEEIRRIYQAL
GSYFNIAYGSGKGEVFDFNLMDFCTTYKLNLVVAYNSLKILEQEGYIELTDELDNPSRII
FLVNKKELYNYQVAHAEMDKFIKILLRILPGVFSQYVRIDEQYIAKSTGLSIDVVVNNLK
TLSRQKIINYIPKKRTPLVIFITERLDDKNLRIEPERYQTLKDRYMKRANAMLDYAQSKA
KCRSQFINEYFGQTNSFRCGKCDVCTSRNELDMSKFEFDKILEKVKAILLEKPTPLENLV
DETNMNPERVLKVIQFLVDTEKISISDDNKLRWNS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagtttgaagaaattcttcgaaaatactggggctacaactcgtttcgctccatt
cagttagatatcatagaatcggtctatagcggaaccgatacacttgcccttatgcccact
ggtggtggaaaatcaataacctttcaggttccagcgctagccatggaaggtatttgtata
gtagtttcgccgctcatagcactaatgaaagaccaggttgagaacctaaagaaaagaggc
ataaatgcaattgccatatactcaggaatgtcgcaacacgaaatcgatattgcattagac
aactgcgcctatggcgatgtaaagtttctttacgtctcgcccgaacggctttccacccct
atttttcgagagagagttcgtaaaatgaatgtttgcatggtggcaatcgacgaagcacat
tgtatttcacaatggggatatgacttccgtccatcatacctgaacatcagcgagttgcgc
gattatatacctgaaaacgttccttttttggccgtcactgccacggcaactcccgatgtg
gccaaagatattcaagataagctgcgttttagggatggacgtgtgtttagaatggatttc
tcgcgcgagaaccttgtttacttagtaagaaatgttgaagacaaagaaaaatatcttttt
aaaatagttgaaaatgttccaggaagcggcgttatctatgtccgaaacagaaaaaaaaca
aaagacgttgctctaatgcttcagcgcgaaggccaatctgcagatttttaccatgcaggc
ctttccatggaaatgcgaaacgcaaaacaaaacgattggcaaactgggaaaacaagaata
attgttgcaaccaatgcttttggtatgggaatcgacaaacccgacgtgcggtttgtcata
catatggacctacctgactctcccgaagcatactttcaggaagctggtagggctgggcgc
gatgggaaattggcatatgctatcctactatacaacgagtctgactctctaaaaattgaa
caaagaattaacacgagtttccctccacctgaagaaattagaagaatttaccaggcactt
ggctcgtattttaatattgcttacggcagtgggaaaggcgaagttttcgactttaacctt
atggatttctgtacaacctataagttaaatcttgttgtagcgtataactctcttaaaatt
cttgagcaggaggggtatattgagctaaccgacgagttggacaaccctagccgaattatt
ttccttgttaacaaaaaggaactttacaactatcaggttgcgcatgccgaaatggataag
ttcattaaaatccttttaagaattctacctggtgtgttcagccagtatgttagaatcgac
gagcaatatattgcaaaatctacaggactttccattgatgtggttgtaaacaatctgaaa
actctatcacgtcaaaaaatcattaattacattcccaaaaagagaacaccgctagttata
ttcataaccgaaagactcgatgacaaaaacctaaggatagagccagaaagataccaaacg
ctgaaagatagatacatgaaacgtgcaaacgcaatgctcgattacgcgcaaagcaaagcc
aagtgccgcagccagttcataaacgaatactttggtcaaaccaatagcttcagatgcgga
aaatgcgatgtttgcacatcgcgaaatgaactcgatatgagcaagttcgaattcgacaag
atactagaaaaggtaaaagcaatccttcttgaaaaacctaccccccttgaaaaccttgta
gatgaaaccaatatgaatcccgaaagggttttaaaagtaatccagttcttagttgacact
gaaaagattagcattagcgacgataacaagttaaggtggaattcctaa
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