Tupaia chinensis (Chinese tree shrew): 102496123
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Entry
102496123 CDS
T02978
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup05016
Huntington disease
tup05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102496123 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
102496123 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102496123 (HTT)
04131 Membrane trafficking [BR:
tup04131
]
102496123 (HTT)
03029 Mitochondrial biogenesis [BR:
tup03029
]
102496123 (HTT)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102496123 (HTT)
Membrane trafficking [BR:
tup04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102496123 (HTT)
Mitochondrial biogenesis [BR:
tup03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
102496123 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
Motif
Other DBs
NCBI-GeneID:
102496123
NCBI-ProteinID:
XP_014445006
LinkDB
All DBs
Position
Un
AA seq
3157 aa
AA seq
DB search
MTTCHLCQLCWLEANYQSGVAPPPPGSDATRRAPCGLPGGIQDGCAPRFRFCPRRGAPFI
AQLLSCAVSPGAGLRPLGAVLRGGRPPPPPPPPGPSVAEEPLHRPKKELSATKKDRVNHC
LTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNL
PRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEES
VQETLAAAVPKIMASFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRR
TQYFYSWLLNVLLGLLVPVEEEHSTLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRK
EMEVSPSAEQLVQVYELTLHHTQHQDHNVVTGALELLQQLLRTPPPELLQALTMAGGIGQ
LTVAKDESSGRSRSGSIVELIAGGGSSCSPVLSRKQKGKVLLGEEEALDDDSESRSDVSS
SAFAASVKGEIGGELTASSGVSTPGSAGHDIITEQPRSQHTLQADSVDLSSCDLTSAATD
GDEEDILSHSSSQISAVPSDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVL
DGADSQYGSMQIGQPQDEDEEAAGGLPDEASTAFRNSSIALQQAHLLKNMGHSRQPSDSS
VDKFVLRDEAAGPGDQENKPCRVKGDIGQSTDDDSAPLVHCVRLLSASFLLTGQKNALVP
DRDVRVSVKALALSCVGAAVALHPESFFSKLYKVPLDTMEYPEEQYVSDILNYIDHGDPQ
VRGATAILCGTLVCAILNRSRFQVGDWMGTIRTLTGNTFSLADCIPLLQKTLKDESSVTC
KLACTAVRHCVMSLCSSSYSELGLQLIIDLLALRNSAYWLVRTELLETLAEIDFRLVSFL
EAKAESLHRGAHHYTGLLKLQERVLHNVVIYLLGDEDPRVRHVAAASLMRLVPKLFYKCD
QGQADPVVAVARDQSSVYLKLLMHETQPPSHFSVSTITRIYRGYNLLPSITDVTLENNLS
RVIAAVSHELIASTTRALTFGCCEALCLLSTAFPVCIWSLGWHCGAPPLSASDESRKSCT
VGMATVVLTLLSSAWFPLDLSAHQDALILAGNLLAASAPKSLRSSWTSEEEANLGATKQE
EVWPALGERSLVPMVEQLFSHLLKVINICAHVLDEVAPGPAIKAALPSLTNPPSLSPIRR
KGKEKEPGEQASVPLSPKKGNEASTASRQSDTSGPVTTSKSSSVGSFYHLPSYLKLHDVL
KATHANYKVTLDLQNSTEKFGGFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFTR
EPMMATVCVQQLLKTLFGTNLASQFDGLSSNPSKSQGRAQRLGSSSMRPGLYHYCFMAPY
THFTQALADASLRNMVQAEQEHDTSGWFDVLQKVPTQLKTNLTSITKNRTDKNAIHNHIR
LFEPLVIKALKQYTTTTSVQLQKQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIE
VGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQ
PIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKW
KRLSRQIADIILPMLAKQQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPNTM
ASVSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSSYLISCPVINRLRDGDSNSTL
EEHSEGKQMKNLPEETFSRFLLQLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCL
IHIFKSGMFRRITAAATRLFTSDGCDGSFYTLESLNARARSMIRTHPALVLLWCQILLLV
NYTDYRWWAEVQQTPKRHSLSSTKLLSPQMSGEEEDSDLAAKLGMCNREIVRRGALILFC
DYVCQNLHDSEHLTWLIVNHVQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCEN
LSTPTTLKKTLQCLEGIHLSQSGAVLTLYVDRLLCTPFRVLARMVDTLACRRVEMLLAAN
LQSSLAQLPVEELNRIQEYLQSSGLAQRHQRLYSLLDRFRLSLVQDSASPSPPITSHPLD
GDGHMSLETVSPDRDWYIRLVKSQCWTRSDSALLEGAELVNRIPAEDMSAFMMNSEFNLS
LLGPCLSLGVSEISSGQRSPLFEAARRVTFDRVSSIVQQLPSVHQVFQPFLPVESTAYWS
KLNDLFGDPTLYQSLTTLARALAQYLVVVSKLPCYLHLPAEKERDTVKFVVMTLEALSWH
LIHQQIPLSLDLQAGLDCCCLALQLPGLWSVVSSTEFVTQACSLIHCVRFILEAIAVQPG
DQLLSPERRMSTPKVVGEDEVDSNIHNPKCVTMACEMVAEMVESLQSVLALGHSRNSSMP
AFLTSVLRNIVISLARLPLVNSYTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEV
FKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQA
ITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKR
ENIATHHLYQAWDPVPSLSPATTGTLISHDKLLLQINPERELGNMSYKLGQVSIHSVWLG
NNITPLREEEWDEEEEEEADVPAPSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILP
SSSAKRTPVILISEVVRSLLVVSDLFTERSQFEMMYSTLTELRRVHPSEDEILVQYLVPA
TCKAAAVLGMDKAVAEPVSRLLESTLRSSYLPSRIAALHGALYVLECDLLDDTAKQLIPV
LSDYLLSNLKGVAHCVNIHSQQHVLVMCATAFYLIENYPLDVGPEFSASVIQMCGVMLSG
SEESTPSIVYHCALRGLERLLLSEQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTC
MYTGKEKISPGRTSDPNPAAPDSESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLD
DFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQ
RTPVAMAMWSLSCFFVSASTSPWVSAILPHIISRMGKLEQVDVNLFCLVATDFYRHQIEE
ELDRRAFQSVFEVVAAPGSPYHRLLTCLRNVHKVATC
NT seq
9474 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctgtcacctttgccagttatgttggttagaagcaaactaccagtcaggcgtg
gccccgcctccgccggggagcgacgctacacgcagggctccgtgtgggctgccgggaggg
atccaagatggctgtgcgcctcggttccgcttttgcccgcggcgcggagctccattcatt
gcccagctgctgagctgtgccgtgtcgccaggagccggtctgaggcctctgggggctgtc
ctgcggggcgggaggccgccacccccgccaccgccgcccggcccgtccgtggctgaggag
ccactgcaccgaccaaagaaagaactctcagctaccaagaaagatcgtgtgaatcattgt
ctgacaatatgtgaaaacatagtggcacagtctctcagaaattctccagaatttcagaaa
cttctcggcatcgctatggaactttttctgctgtgcagtgatgatgcagagtcagatgtc
aggatggtggctgatgaatgcctcaacaaagttataaaagctttgatggattctaatctc
ccgaggttgcagttagaactctataaggaaattaaaaagaatggtgcccctcgaagtttg
cgtgcagccctgtggaggtttgctgagttggctcacttggttcggccccagaaatgcagg
ccttacctggtaaatcttctgccatgcctaacccggaccagcaagagacctgaggaatca
gtccaagaaaccttggctgctgcagttcccaaaattatggcttcttttggcaattttgca
aatgacaatgaaattaaggttctattaaaggcttttatagcgaatctgaagtcaagctcc
cctaccattcggcggacagcagctgggtcagcagtgagcatctgccagcactcaaggagg
acacagtatttttatagctggctactaaatgtgctcttaggtttgctagttcctgttgag
gaagagcattctaccctcctgattttgggtgtgttgcttacactgaggtatctggtgccc
ttgctacaacagcaggtcaaggacacaagcctgaaaggcagctttggggtgacacggaaa
gaaatggaagtctctccctctgcagagcagcttgtccaggtttatgagctgactttgcat
cacacgcagcaccaagaccacaatgtggtgactggagcattggagctcttacagcagctc
ctgcgaacgcccccgcctgagctcctgcaagcacttaccatggcaggtggcatcgggcag
ctgactgtggctaaagatgagtctagtggccgaagccgtagtgggagtattgtggaactc
atagctggagggggttcctcatgcagccctgtcctttcaagaaaacaaaaaggaaaagtg
ctcttaggagaagaggaggccttggacgatgactctgagtccaggtcagacgtcagcagc
tcagcctttgcagcctcagtgaaaggtgagattggtggagaactgactgcttcttcaggg
gtctccactcccgggtctgctggtcatgacatcattactgagcagccacggtcacagcac
acattacaggcagactcagtggatctgtctagctgtgacttgacaagtgctgccactgat
ggagatgaggaggacatcttgagccacagctccagccagattagtgcagtcccatctgac
cctgccatggacctgaacgatgggacccaggcctcttcacccatcagtgacagctcccag
accaccactgaggggcctgactcagccgtcactccttccgacagttctgaaattgtttta
gatggtgctgacagccagtatgggagcatgcaaattggacagccccaggatgaagatgaa
gaagcagcaggtggtctccctgatgaagcctccactgctttcagaaactcttccattgct
cttcagcaagcacatttattgaaaaacatgggtcatagcaggcagccatctgacagtagt
gtagacaagtttgtattaagagatgaagctgctggaccaggtgatcaagagaacaagcct
tgccgagtcaaaggtgacataggacagtctactgatgatgattctgctcctcttgttcat
tgtgtccgtcttttatctgcttcgtttttactaactgggcaaaaaaatgcactggttcca
gacagggacgtgagagtcagtgtaaaggctctggcactcagctgtgttggggcagctgtg
gcccttcatccagaatctttcttcagcaaactgtataaagtacctcttgacaccatggag
taccctgaggagcagtatgtctcagacatcttgaactacatcgatcacggagacccacag
gtcagaggagccactgccattctttgtgggacccttgtctgtgccatcctcaacaggtcc
cgcttccaggtgggagactggatgggcaccataagaactctgacaggaaatacattttct
ctggcagactgcattcctttgcttcagaaaacattgaaggatgaatcttctgtcacttgc
aagttggcatgtacagctgtgaggcactgtgtcatgagtctctgcagcagcagctacagt
gagttggggttacaactgattattgacctgctggctttaaggaatagtgcctattggctg
gtgaggacagagctgttggaaactcttgcagagattgactttaggttggtgagctttttg
gaggcaaaagcagaaagcttacatagaggggctcatcattatacagggcttctaaaactg
caggaacgtgttctccataatgttgtcatctacttacttggggatgaagaccccagggtg
agacatgttgctgcagcatcgttaatgaggctcgtcccaaaactgttttataaatgtgac
caaggacaggcagatccagtagtggccgtggcaagagatcaaagcagcgtttacttgaaa
cttcttatgcatgagacgcagccaccttcccacttctccgtcagcacaatcaccagaata
tatagaggctataacttactgccaagtataacagatgtcactttggaaaataacctttcg
cgagttattgcagcagtttctcatgaactaatcgcatcaaccacgcgagcgctcacattt
ggatgctgtgaagctttgtgtcttctttcaactgcttttccagtttgcatttggagttta
ggttggcattgtggagcgcctccgttgagtgcctcagatgagtccagaaagagctgcact
gttgggatggccacagtggttcttaccctcctttcatcagcgtggttcccactggatctc
tcagcccatcaagatgctttgattttggctggaaacttgcttgcagccagtgcccccaaa
tctctgagaagttcctggacctccgaagaagaagccaacctaggcgccactaaacaagag
gaggtgtggccagctctgggggagcgcagtctggtgcccatggtggaacagctgttctcc
cacctactgaaggtcattaatatatgtgctcacgtcttagatgaggtggctcctggacca
gctatcaaggcagctttgccctctctaacaaaccccccttctctaagtcccatccgacga
aagggaaaggagaaagagccaggggaacaagcatctgtaccgttgagtcccaagaaaggc
aatgaggccagcacagcctccagacaatctgatacctcagggccggtcacaacaagtaaa
tcatcatcagtggggagtttctatcatcttccttcatacctcaaattgcatgatgtcctg
aaagctactcatgctaactacaaggtcacgttggatctccagaacagcactgaaaagttt
gggggttttctgcgctctgccttggatgttctctctcagattctagagctggcgactctg
caggacattgggaagtgtgttgaggagatcctaggatacttgaaatcctgctttactcga
gaaccaatgatggcgactgtttgtgttcaacagttattaaaaactctctttgggacaaac
ctggcctcccagtttgatggcttgtcttccaaccccagcaaatctcaaggccgagcacag
cgtctgggctcttccagcatgaggccaggcttgtatcactactgcttcatggctccatac
acccacttcacccaggccttagctgacgccagcctgaggaacatggtgcaggcggagcag
gagcacgacacctcgggatggtttgatgtccttcagaaagtgcctacccaattgaagaca
aacctcacaagcattacaaaaaaccgtacagataagaatgctattcataatcacattcgt
ttatttgaacctcttgttataaaagctttaaaacagtatacaacaacaacatctgtacaa
ttacagaagcaagttttagatttgctggcacagctggttcaattacgggttaattactgt
cttctggattcagatcaggtattcattggatttgtgctgaaacagtttgaatacatcgaa
gtgggccagttcagggaatctgaggcaattattccgaacatctttttcttcctggtatta
ctgtcttatgaacgctatcattcaaaacagatcattggaattcctaagatcattcagctc
tgtgatggcatcatggccagtgggaggaaggctgtgacacatgccataccggccctacag
cccatagtccatgacctctttgtattaaggggaacaaataaggctgatgcaggaaaagag
cttgaaacccaaaaagaagtagtggtgtcaatgttactgagactcatccagtaccatcag
gtgttggagatgtttatccttgttctgcagcagtgccacaaggagaatgaggacaagtgg
aaacggctgtcgcgacagatagctgacatcatcctcccgatgttagccaaacagcagatg
cacattgactctcatgaagcccttggagtgttaaatactttatttgagattttggctcct
tcatccctccgtcctgtggacatgcttttacggagtatgttcgtcactccaaacacaatg
gcatctgtgagcactgttcaactgtggatatcaggaattctagccattctgagagtttta
atttcccagtcaactgaagatattgtcctttctcgtattcaagagctctccttctcttct
tatttaatctcctgtccagtaattaataggttaagagatggtgatagtaattcaacactg
gaagagcacagcgaagggaaacaaatgaagaatttgccagaagaaacgttttcaaggttt
ctattacaactggttggtattcttttagaggacattgttacaaaacagctaaaagtggaa
atgagtgaacagcaacatactttctattgccaagaactaggcacactgctcatgtgtctg
atccacatcttcaagtctggaatgttccggagaatcacagcagctgccactagactcttc
accagcgatggctgtgatggcagtttctatacactggagagcttgaacgcgcgggcgcgc
tccatgatccgcacacatccggccctggtgctactctggtgtcagatcctgctactggtc
aactacactgactaccgctggtgggcagaggtgcagcagacgcccaaaagacacagtctg
tccagcacgaagttgcttagtccccagatgtctggagaggaggaagactctgacttggca
gccaaacttggaatgtgcaatagagaaatagtgcgaagaggggctctcattctcttctgt
gattatgtttgtcagaacctccacgactctgagcatttgacgtggctcattgtgaatcat
gttcaggatctgatcagtctgtcccatgagcctccagtgcaggacttcatcagtgctgtc
caccgaaattccgctgctagtggccttttcatccaggcaattcagtctcgctgtgaaaat
ctttcaacccccaccactctgaagaaaacactccagtgcctggaagggattcatctcagc
cagtcaggtgctgtgctcaccctgtatgtggacaggcttttgtgcacccctttccgtgtg
ctggctcgcatggttgataccctcgcctgtcgccgagtagaaatgcttttggctgcaaat
ttacagagcagcttggcccagttgccagtggaagaactgaacagaatccaggagtacctg
cagagcagcgggcttgctcagagacaccaaaggctctattccttgctggacaggtttcgt
ctatcccttgtacaagactcagctagcccctctcctccaatcacttcccacccgctggac
ggggatgggcacatgtcactggaaacagtgagtccagacagagactggtatatccgtctt
gtcaaatcccagtgttggaccaggtcagattctgcactgctggaaggtgcagagctagtg
aatcggatccctgcggaagatatgagtgccttcatgatgaattcggagttcaacctaagc
ctattaggtccatgcttaagcctaggcgtgagtgagatttctagtggccaaaggagtccc
ctttttgaagcagctcgcagggtgactttcgaccgtgtgtccagcattgttcagcagctt
ccttctgtccatcaagtcttccagccctttctacctgtggaatccacagcttactggagc
aagttgaacgatctgttcggggatcccacattgtatcagtccctgacaactttggccaga
gccctggcacagtatttggtggtggtctccaaactgccctgctatttgcatcttcctgct
gagaaggagagggacacagtgaaatttgtggtgatgacccttgaggccctgtcatggcat
ctgatccaccagcaaatcccgctgagtctggatctccaggcggggctggactgctgctgc
ctggccctgcagctgcctggactctggagcgtggtctcctccacggagtttgtgactcag
gcctgctccctcatccactgcgtgcgattcatcctggaggccattgcagtgcagcctgga
gaccaacttctcagtccagagagaagaatgagtactccaaaggttgtcggagaagatgaa
gtagattcaaacatacacaatcctaagtgtgttaccatggcctgtgagatggtggcagaa
atggttgagtctctacagtcagtgctggccttgggtcacagccggaatagcagcatgcca
gcgtttctcacgtcggtgctcaggaacattgtcatcagcctggcacgcctgccccttgtc
aacagctacactcgtgtgcctcccctggtgtggaaattaggatggtcacccaaacctgga
ggggattttggcacagcattccctgagatccctgtggagttcctccaggaaaaagaagtc
tttaaggagttcatctaccgcatcaacacactagggtggaccagtcgcacccagtttgaa
gaaacatgggccacgctcctcggtgttctggtgacccaacccctcgtgatggagcaggag
gagagcccaccagaagaagacacagagaggacacagatcaacgtcctggctgtgcaggca
atcacctccctggtgctcagtgcgatgaccgtacctgtggctggcaacccagctgtgagc
tgcttggagcagcaaccccggaacaagcccctgaaagctcttgataccaggtttgggagg
aagttaagcattatcagagggattgtagagcaagagatccaagcaatggtttccaagaga
gagaacattgctacccatcatttataccaggcctgggaccctgttccttctctgtctccg
gctactacaggcaccctcatcagccacgacaagctactgctgcagattaaccccgaacga
gagctggggaacatgagctataaacttggccaggtgtccatacattctgtgtggctaggg
aacaacatcacacccctgagagaagaggagtgggacgaggaggaggaggaagaggctgat
gtcccggcaccttcatcaccacccacatctccagtcaactccaggaaacaccgggctgga
gttgatatccactcctgttctcagtttttgcttgaattgtatagtcgctggatcctgcca
tctagttcagccaaaaggaccccggtcatcctgatcagtgaagtggttcgatctctcctg
gtagtctcagacttgttcactgaacgcagccagtttgaaatgatgtactcaaccctgaca
gaactgcggagggtgcacccctcagaagatgagattctcgtacagtacttggtacctgcc
acctgtaaagcagctgctgtccttggaatggacaaggctgtggccgagccagtcagccgc
ctgctggaaagcacactgaggagcagctacctgcccagcaggatcgcagccctgcacggt
gccctctacgtgctggagtgtgatctcctggacgacaccgcaaagcagctcatcccagtc
ctcagtgactaccttctctccaacctcaaaggagtagcccactgcgtgaacatccacagc
cagcagcacgtgctggtgatgtgtgccactgccttctacttaattgagaattatcctctg
gacgtagggccagaattctcggcatcagttatacagatgtgtggagtgatgctctcagga
agtgaggagtccactccctccatcgtttaccactgcgcccttagaggcctcgagcgcctc
ctgctctctgagcagctgtctcggctggatgcagaatccctggtcaagctgagcgtggac
agagtgaacgtgcacagcccgcatcgggctatggcagccttgggtctgatgcttacctgc
atgtacacaggaaaggagaaaatcagtccaggtagaacctctgaccctaaccctgcagct
ccggacagcgagtcagtgattgtggctatggagcgggtatctgttctttttgataggatc
aggaaggggtttccctgtgaagccagggtggtggcaaggatcctgcctcagtttttagat
gacttcttcccaccccaggatgtcatgaacaaagtcattggagagtttctctccaaccag
cagccatacccccagttcatggccaccgtggtatacaaggttttccagactctgcacagc
accggacagtcgtccatggttcgtgactgggtcatgctgtccctctccaatttcacgcag
agaacaccagttgccatggccatgtggagtctttcgtgcttcttcgtcagcgcttccacc
agcccgtgggtctcagccatccttccacacatcatcagcaggatgggcaaactggagcag
gtggatgtgaaccttttctgcttggttgccacagacttttacagacaccagatagaggag
gagctggatcggagagcctttcaatctgtgtttgaggtggtcgcagccccaggaagcccg
tatcatcggctactgacttgtttgagaaatgtccacaaggttgccacctgttga
DBGET
integrated database retrieval system
