KEGG   Tachysurus vachellii: 132847280
Entry
132847280         CDS       T09596                                 
Symbol
col13a1
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
tvc  Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tvc00536]
    132847280 (col13a1)
Glycosaminoglycan binding proteins [BR:tvc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   132847280 (col13a1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 132847280
NCBI-ProteinID: XP_060728418
LinkDB
Position
6:13903332..13979419
AA seq 698 aa
MEQDTKVSRDSHGERTCAEHPCKSDAWPRRTEVCGAVAVCVALCLFSLGVSVLFYLRTSE
LQARVNSLEKHREPQQHSAWMFLEQVEPVLLNRLDQMLEEKLASRLPKTRETRDVSHACL
CPPGPPGPPGRAGFPGDKGSMGIPGRMGLKGNTGDKGAPGEPGVSIIGPRGPPGQPGTRG
FPGFPGPIGLDGKPGQNGQKGDMGAPGPKGLPGEQGPKGEKGVCGDYTHRMLPITVRNMP
SISPLILKRLKQGEPGAQGPPGLPGPPGPPGSPGLTGANGPPGKPGEPGKPGKEVRMLTA
MKGEPGVPGQKGDRGDTGLTGPEGPKGFKGDQGQKGEEGKMGLAGEKGEKGERGMPGMPG
KQGVKGEIGFPGAPGLKGQTGIPGIPGKRGYKGEKGEMSSTGVGVKGEPGVPGLPGHKGQ
KGDQGIKGETGPEGQPGPRGPPGATGEPGKMLINNNENDIRNVQLMGPPGLPGPPGIPGA
KGEVGLPGPPGLDGEKGPRGKAGEPGAIGPPGLRGEGGVMGFPGPKGDKGDMGPAGSPGQ
KGDAGENGEKGEQMYGLPGPPGPAGPVGPMGPPGLSGPKGEPGLGVRGEKGSPGQKGDKG
DRGHLGLPGLIGPPGIPGPAGPKGERGEKGEMGVAGPIGPQGIPGLVGPPGLKGNRGERG
KRGNRGAKGDKGDQGAPGLDAPCPLGDDGLPVPGCWNK
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggaacaagacaccaaagtttctcgcgattcacatggagaaaggacttgcgccgagcat
ccgtgtaaaagtgacgcctggccgaggcgcactgaggtgtgtggtgcggtggcggtgtgc
gtcgcgctctgcctcttctctctcggagtgtctgtgctgttttatttgcgcacctcggag
ctacaggccagggtaaacagcttggagaagcacagagagccccagcagcactcagcctgg
atgtttcttgagcaggtggaaccagtgctcttaaatcgcctggatcagatgctggaagag
aagttagcatctcgtctgccaaagaccagagagactcgggatgtctcccacgcctgtctg
tgtccaccaggacctcctggtcctcctggacgagctggctttccgggagacaaaggatca
atgggcattcctggaagaatgggcttaaagggaaacacaggggacaagggagctccaggg
gagccaggtgtatctatcattggcccacgaggacctcctggtcagccgggcactagagga
tttcctggctttccgggtcctattggtttggatggcaagcctgggcaaaatggtcagaaa
ggagacatgggtgcaccaggtcccaaaggacttcctggtgagcaaggtccaaagggggaa
aagggtgtgtgtggtgattatacacatcggatgttgcccatcaccgtgcgcaacatgccc
tcaataagccctctaattctaaagcgcctcaagcagggtgagcctggagcacaaggaccc
ccagggcttcctggccctccagggcctcctggtagcccaggattgactggtgctaatggg
ccaccgggaaaacctggagaacctggaaaaccaggaaaagaagtgaggatgttgacagca
atgaagggagaaccgggtgtaccaggacaaaagggtgatcgtggtgatacaggattaact
ggacctgaaggccccaagggattcaaaggggatcaaggacagaagggagaggaggggaag
atgggtcttgcaggagagaaaggagagaagggtgaaagagggatgcctggaatgccagga
aaacaaggagtaaagggagaaattggttttccaggtgctcctggactaaagggtcagaca
ggtattcccggtattccggggaagcgaggctataagggtgaaaagggggaaatgagttct
acaggagttggtgttaaaggagaaccaggagtgccaggactgccaggacacaagggtcaa
aaaggtgatcaaggcattaagggtgaaacaggacccgagggccaaccaggaccaagaggt
cctccaggtgcaacaggagaaccaggcaaaatgttaataaacaacaacgagaatgatatt
cgtaatgtgcagctaatgggcccacctggtctacctgggcctcctgggatacctggtgcc
aagggtgaagttgggctgcctgggcctcctggtctcgatggggaaaagggtcctcgggga
aaagcaggagagcctggagccattggcccacctggactgcgaggagagggaggagttatg
ggcttcccgggacctaaaggggataaaggagacatgggtcccgctggatcacctggtcag
aaaggtgacgctggtgagaatggagaaaaaggagaacagatgtatggcctaccaggacct
ccaggacctgcagggccagtggggccaatgggacctccaggattgtcagggccaaagggg
gagccaggtctgggtgtgagaggagagaaaggatcacctggacagaaaggagataaagga
gatagaggtcatcttggattaccaggtcttataggaccgcctggtatacctggaccagca
ggaccaaaaggagagaggggtgagaaaggagaaatgggagtagcaggaccaatagggcct
caaggcatccctggcttagtaggaccaccaggattaaaaggaaaccggggggagaggggc
aagagaggcaacaggggggccaaaggggataagggagaccaaggagccccaggattagat
gccccttgtcctttgggtgatgatggcctaccagtaccaggatgttggaataaatga

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