KEGG   Thalassomonas viridans: SG34_017985
Entry
SG34_017985       CDS       T08831                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
tvd  Thalassomonas viridans
Pathway
tvd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tvd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SG34_017985 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tvd02044]
    SG34_017985 (tssH)
Secretion system [BR:tvd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SG34_017985 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_16 AAA_5 AAA_22 nSTAND3 Sigma54_activat IstB_IS21 AAA_25 AAA_30 ATPase_2 Clp_N AAA_7 AAA_18 NACHT SLFN-g3_helicase TniB AAA_14 Rad17 TsaE Zeta_toxin SRP54 DUF815 AAA_24 ResIII TIP49 Hpr_kinase_C AAA_33 HIP1_clath_bdg
Other DBs
NCBI-ProteinID: WDE03283
LinkDB
Position
complement(4051345..4053957)
AA seq 870 aa
MSAMTLNKLVEKLNPVCRKSLEAAAGICHSRSQFTVEMEHWLLAMLEQDAGDFSLILASF
SVDKERLLVQLCQGLEKLKTGNSAAPSLSPHIVNLLRQSWLNTSIEFNDNQVRSGYVIYT
LVNDESLTTLISRSAGQITEIDPAQLLHAWGQLAPKSPESAIGNQGELSRQETAALGGAA
KNPGLNQFTQDLTALAKAGKIDPILGRDNEIRQMADILTRRRQNNPILTGEAGVGKTAVV
EGLALKIAEQDVPDALKNVSIRVLDLALLQAGAGMKGEFENRLKSLINEVKAFPEPVILF
IDEAHTMIGSGGAAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALSRRFQVV
KIEEPGELQAAAMMRGLLPVMEKHHQVFVTDKALNAAVSLSHRYISGRQLPDKAVSLLDT
ACARVAMSRASTPGAIENLQRRAQQLEMQISLLSREAKTGVDHQQVIGELELALTAARDE
LTLLTSAWQNERELVKKVTCLTLELQDEHKDTPALVTELNRLKATLAENSQPMVFYQVDE
QLVAQVIADWTGIPVGKMQHDEIATILALQQNMAGRIVGQDHALALIAKTVQTSRAQLGD
EKRPNGVFLLCGPSGVGKTETALALAEQVYGSEDKVTVINMSEFKEEHKVSLLLGSPPGY
VGYGEGGVLTEAVRRKPYSVILLDEMEKAHPGVQDIFYQVFDKGAIKDGEGRDIDFKNTI
IIMTSNVGTETTMELFADENTAPSPSGLAKAIQDDLLGYFKPAFLGRVNVVPYVPLSRDM
LSDIAQLQLARVAERLEKYYRASFDYSPQVVDKIVAMCRDAGSGARNIHHILQNTLLPEL
SVRILEKMATNELTTSVKVNIKGGEFNYKV
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgtcagctatgaccctaaacaaactggtggaaaaacttaaccctgtttgccgcaaatct
ctggaagcagcggcaggtatttgccacagccgcagccagtttaccgtggaaatggagcac
tggctgttggctatgctggagcaggatgccggagattttagcctgatcctcgctagtttc
tcggtagataaagaacgcttgctggttcagttatgccagggcctggaaaagcttaaaacc
ggcaacagtgccgcgccgagtttatcgccgcatattgtcaacctgctgcggcaaagctgg
cttaataccagcatagaatttaacgataatcaggtgcgttccggttatgtcatctatacc
ctggttaacgatgaaagtttaaccacactgatttcacgctctgcagggcaaataaccgaa
atcgatccggcgcagctgctgcatgcctgggggcagttagctcccaaatctccggaatca
gctattggcaaccagggagagctgtcccggcaggaaacggcggcgcttggcggggcagca
aaaaacccggggctgaaccagtttacccaagatctcaccgccctggccaaagcggggaaa
attgaccctatcctgggacgggataacgaaatccgccagatggcggatatcctgacccgg
cggcgtcagaacaatccgattttaaccggtgaagccggggtggggaaaaccgccgtggtt
gaaggtttggcgcttaaaattgctgaacaggatgtgccggatgccttgaaaaatgtcagc
atccgggtgttggatctggcactgctgcaggcgggggcgggtatgaaaggggagtttgaa
aaccggcttaaatccctgatcaacgaggtcaaggcattccctgagcccgtgatcttattt
atcgatgaagcccataccatgataggcagcggcggggcggcgggacaaaacgatgccgcc
aatctgttaaagcctgcactggccagaggcgagctacgcaccattgccgccacgacctgg
gcagaatacaaaaaatattttgaaaaagacgctgccctgagccggcgtttccaggtggtt
aaaatcgaagagccgggggaactccaggcggcggctatgatgcgggggctgttgcctgtg
atggaaaagcatcaccaggtttttgttaccgacaaagcgcttaatgccgcggtaagttta
tcgcaccgctatatcagcggccggcagttgcccgacaaggcggtgagtctgcttgatacc
gcctgtgcccgggtagccatgagccgggcatcgaccccgggggcgatagaaaatttgcag
cgcagggcacagcaattggaaatgcaaatcagcctgctgtcaagggaagcgaaaaccggg
gtggatcaccaacaagtaatcggtgagctggagctggcattaacggccgccagggatgag
ttaactttattgacttccgcctggcaaaacgagcgggagctggtgaaaaaggtcacctgc
ttaacccttgagttgcaggatgagcataaagataccccggcacttgtcactgagctgaac
cggttaaaagccaccctggcagaaaacagccagcccatggtgttttaccaggtggacgag
cagttggtggcacaagttattgccgactggaccggcattccggtgggaaaaatgcagcat
gatgaaatcgccaccattttggccttgcagcaaaacatggccgggcgcattgtcggccag
gatcatgccctggcgttgattgccaaaacggtgcaaacctcgcgtgcgcagcttggcgat
gaaaaacgccccaacggcgtattcctgctttgcggtccgagcggggtcggcaaaaccgaa
accgccctggcactggcggaacaggtatacggcagcgaagacaaggtgacggtgatcaat
atgtctgagtttaaggaagagcataaggtttccctgttgctgggctctcctcccgggtat
gtcggttacggcgaaggcggggtattgaccgaggcggtgcgccgcaagccttatagcgtg
atcttgcttgatgaaatggaaaaagcccatcccggggtgcaggatattttctatcaggtt
tttgataagggcgccattaaagacggtgaaggccgggatatcgactttaaaaataccatt
atcatcatgacctcaaacgtcggcacggaaaccaccatggagctgtttgccgatgaaaat
accgcgccgtcgccgtcaggcttagccaaggcgatacaggatgatctgctcgggtatttc
aaaccggcgtttttaggccgggtgaatgtcgtgccttatgttccccttagccgcgatatg
ctcagcgatatcgcccagctgcagctggcgcgggtggctgagcgtctggagaaatattac
cgggccagctttgactacagtccgcaggtggtggataaaattgttgccatgtgccgggat
gcaggctcgggggcgcgtaatatccatcatattttacaaaataccctgctgccggagctc
tcggtcaggatattggagaaaatggcgactaatgagctgaccacttcggtgaaagtcaat
attaagggtggggagtttaactataaggtttag

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