Trinickia violacea: FAZ95_07275
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Entry
FAZ95_07275 CDS
T09503
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
tvl
Trinickia violacea
Pathway
tvl02020
Two-component system
tvl02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FAZ95_07275
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FAZ95_07275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tvl02035
]
FAZ95_07275
Bacterial motility proteins [BR:
tvl02035
]
Flagellar system
Chemotaxis proteins
MCPs
FAZ95_07275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
HAMP
DUF948
ATG17_like
V_ATPase_I
GAPES1
Mod_r
Motif
Other DBs
NCBI-ProteinID:
QCP49000
UniProt:
A0A4V1EH46
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Position
1:1592251..1594050
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AA seq
599 aa
AA seq
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MFDSIRSRVLAACLAIVVCSLVANAALNYFVVSSYDNDSINNNLIALANGHDAGIGDWVA
SKTAAIVSLEDVALTADPVPTFKQVAAAGGFTNVYVGTADKAAKFSDPTGVPADYDPTGR
PWYKQAAAAGKPVVTPPYVDAGSGKLVVTFAVPIVRDGALKAVVSGDVNMDSVIANVKSI
HPTPSSFGMLLDASGTIVGHPDSKLTLKPVSELMPDLSVANLASLTTADHPLEVHVDGRA
KLLRGQAVPGTDWITVVALDESEATAGMRSFLTTSAIALIVIVALAAAVVSAITATAFKR
LSLVRDAMDAIGSGTGDLTQRLPSDGRDEVAQIARSFNTFVDKLHHVMRQIRDTSESVRT
AADEIAAGNLDLSGRTEAAAASLQQTAASMEEITSTVTQSASAARQANEMAGSASAVASR
GGEVVSEVVSTMGTIETASGKIGDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV
AGEVRSLAQRSAQAAKEIKSLIESTIDSVSSGSSQVRRAGDTMTEIVSNVSSVTTIMAEI
TNAADEQTRGIQEVNRAVTQLDEMVQQNAALVEESAAAASALQTQAVQLAGAVGQFRLD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattcgatccgctcgcgcgtgctggcagcctgtcttgccattgtcgtctgctcg
ctcgtcgcgaacgccgcgctcaactacttcgtcgtcagctcctacgacaacgattcgatc
aacaacaatctgatcgcgctcgccaacgggcacgatgcgggcatcggcgattgggtcgcg
tcgaagacggcggcgatcgtctcgctcgaagatgtcgcgctcaccgcggacccggttccg
acgttcaagcaagtcgccgcggccggcggctttacgaacgtctatgtcggcaccgccgac
aaggccgccaagttctccgatccgaccggcgtgcccgccgattacgatccgaccggacgc
ccgtggtacaagcaggccgccgcagccggcaagccggtggtgacgccgccgtatgtcgat
gcgggctcgggcaagctcgtcgtcacgttcgccgtgccgatcgtgcgcgacggcgcgctg
aaggcggtggtgtcgggcgacgtgaacatggacagcgtgatcgccaacgtcaagtcgatt
catccgacgccgtcgagcttcggcatgctgctcgatgcgagcgggacgattgtcgggcat
cccgattcgaagctcacgttgaagcccgtcagcgagctgatgccggacttgagcgtagcg
aacctcgcatcgctcacgacggcggatcatccgctcgaagtgcacgtcgacggtcgcgcg
aagctgctgcgcggccaagcggtgccgggcaccgactggatcacggtcgtggcgctcgac
gagtccgaggccacggccggcatgcgctcgtttctgacgacctcggcgatcgcgttgatc
gtcatcgtcgcgctcgcggccgccgttgtcagcgcgatcaccgcgaccgcgttcaagcgc
ctctcgctcgtgcgcgacgcgatggatgcgatcggctcgggcaccggcgacctgactcag
cgtctaccgtcggacggccgcgacgaagtcgcgcagatcgcgcgctcgttcaacacgttc
gtcgacaaactgcaccacgtgatgcgtcagatccgcgatacgagcgaatcggtgcgcacc
gccgccgacgaaatcgcggcgggcaacctcgacctctcgggccgcaccgaagcggcggcg
gcgagcctgcagcagacggcggcgtcgatggaagagatcacgtcgacggtcacgcaatcg
gcgagcgctgcgcgccaggccaacgagatggcgggctcggcctcggcggtggcgtcgcgc
ggcggcgaagtcgtgtcggaagtggtgagcacgatgggcacgatcgagacggcgtcgggc
aagatcggcgacatcatcggcgtgatcgacggcatcgcgttccagaccaacattctcgcg
ctcaacgcggccgtcgaagcggcgcgcgcgggcgagcaggggcgcggcttcgcggtggtc
gcgggcgaggtgcgcagtctcgcgcaacgcagcgcgcaagccgccaaggagatcaagtcg
ctgatcgaatcgacgatcgacagcgtctcgtcgggctcgagccaggtgcggcgcgcgggc
gacacgatgacggaaatcgtgagcaacgtgtcgagtgtgacgaccatcatggccgagatc
acgaacgccgccgacgagcagacgcgcgggattcaggaagtcaatcgcgcagtgacgcag
ctcgacgagatggtgcagcagaacgcggcgctggtggaggaatcggcggctgccgcatcg
gcgctgcagacgcaggcggtgcagcttgcgggcgcagtggggcagttcaggctggattga
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