Thermoactinomyces vulgaris: AB849_004840
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Entry
AB849_004840 CDS
T05864
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tvu
Thermoactinomyces vulgaris
Brite
KEGG Orthology (KO) [BR:
tvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvu03032
]
AB849_004840 (gyrB)
03400 DNA repair and recombination proteins [BR:
tvu03400
]
AB849_004840 (gyrB)
Enzymes [BR:
tvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AB849_004840 (gyrB)
DNA replication proteins [BR:
tvu03032
]
Prokaryotic type
DNA Topoisomerases
AB849_004840 (gyrB)
DNA repair and recombination proteins [BR:
tvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB849_004840 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QBK12978
LinkDB
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Position
complement(927872..929785)
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AA seq
637 aa
AA seq
DB search
MSIQQTNYDETQIQVLEGLEAVRRRPGMYIGSTSSRGLHHLVWEVVDNSIDEALAGRCDT
IQVIVNEDNSVTVIDNGSGIPVGIHPKMGRPAVEVVMTVLHAGGKFGGDGYKFSGGLHGV
GVSVVNALSTWLSVEVKRDGKIYHQRYQRGVPDADLEVIGETEETGTKITFKPDPEIFTE
TTEFDFNILQNRLRELAFLNGGVKIILKDLRGEEEKEVVFQFEGGIRSFVEHLDRNREVL
NQPPVYIQGERDSILIEIALQYNDSFTSNIYSYANNIHTHEGGTHEAGFKSALTRVINDY
ARRNNLLKDNDSNLTGDDVREGLTAIISVKIMDPQFEGQTKTKLGNSEARSATEQLFADH
FQTYLDEHPAEAKKIINKAVMASRARQAARKARELTRRKNALEVSALPGKLADCTSRSAQ
DSELFIVEGDSAGGTAKQGRDRMFQAILPLKGKIINVEKARLDRALSNDEIRTIITALGT
GIGDDFNIEKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRPLIEHGYVYIAQPPLYKI
TQGKKIRYAFNDKMKDEIVAELQGKGKIEIQRYKGLGEMNATQLWETTMDPESRTLLRVS
LQDAMDADEVFEMLMGDRVAPRREFIKEYAQQANLDI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgtccattcaacaaacaaattatgatgaaacacaaattcaggtgttagaaggtctggaa
gccgtacgaaggcggccgggaatgtacattggttccacttccagccgcggtctccatcat
ttggtgtgggaagtggtggacaacagtatcgacgaagcactggccggccgttgtgatacc
attcaggtgattgtcaatgaagacaacagtgtgaccgtgattgacaacggaagcgggatt
cctgtcgggatccacccgaaaatgggccgtccggcggtggaggttgtgatgacggtcctt
catgccgggggtaaattcggcggagacggatacaaattttccggcggtttgcacggtgtg
ggggtttctgttgtcaatgcgttgtcgacatggctgtcggtcgaagtgaagcgtgacggg
aaaatctatcatcaacgttatcaacgaggggttccggatgcggatttggaagtgatcgga
gaaacagaggaaacagggaccaaaatcacctttaaaccggatcccgagatcttcacggaa
accaccgagtttgatttcaacattttgcaaaaccgtctgcgcgaacttgctttcttaaac
ggcggcgtaaagatcattttaaaggatttgcgcggcgaagaagaaaaagaagtggttttt
cagtttgaaggcggaatccggtcttttgtggagcatttggaccggaatcgcgaagtgttg
aatcaaccgccggtatacattcagggggaacgggattccatcctgattgaaatcgctttg
caatacaacgactcttttacatccaacatctattcttatgccaataacatccacacgcac
gagggcggtacgcatgaagccggctttaaatcggctctgacgcgcgtgatcaatgattat
gcccgccggaacaaccttttgaaggataatgacagcaatttgaccggggacgacgtgcgg
gaaggcttgaccgccattatcagcgtgaaaattatggatcctcagtttgaagggcaaacc
aaaaccaaactggggaacagcgaagcccgttccgcaaccgagcagctctttgccgatcat
ttccaaacctatttggacgagcatcccgcggaagcgaaaaagattattaacaaagccgtg
atggcgtcccgtgcccgccaggccgcccgcaaagcccgggaattgacacggcgcaaaaac
gcgttggaggtcagtgcattgcccgggaaactggcggattgcacctcccgcagcgctcag
gacagcgagcttttcattgtggagggggattctgccggcggtaccgcaaaacaaggacgg
gaccggatgttccaagccattttgccattgaaaggaaaaatcatcaatgtggagaaagca
cgactggaccgggcgctttccaatgatgagattcgcaccatcattacggcattgggaacc
ggaatcggcgatgatttcaatattgaaaaggcccgttatcacaaaatcatcattatgacg
gatgccgacgtcgacggtgcccacatccggactttgctgctcaccttcttttaccggtac
atgcgtccgttgattgaacatggatatgtctatattgcccaaccgcctctgtataaaatt
acgcaaggcaaaaagatccggtatgcgttcaatgacaagatgaaagatgaaatcgtggcc
gagctccaagggaaagggaaaatcgagatccaacggtacaaagggttgggggaaatgaac
gccacccagctgtgggaaaccaccatggatccggaaagccgcaccttgctccgtgtttct
ttgcaagatgccatggatgccgatgaagtgtttgaaatgttgatgggagaccgcgtggca
ccgcgtcgggaatttatcaaggagtatgcacaacaggcgaaccttgatatttag
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