Ursus arctos (brown bear): 113250835
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Entry
113250835 CDS
T05909
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah04622
RIG-I-like receptor signaling pathway
uah05161
Hepatitis B
uah05162
Measles
uah05164
Influenza A
uah05168
Herpes simplex virus 1 infection
uah05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113250835 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
113250835 (IFIH1)
05171 Coronavirus disease - COVID-19
113250835 (IFIH1)
05164 Influenza A
113250835 (IFIH1)
05162 Measles
113250835 (IFIH1)
05168 Herpes simplex virus 1 infection
113250835 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
uah04054
]
113250835 (IFIH1)
Enzymes [BR:
uah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113250835 (IFIH1)
Pattern recognition receptors [BR:
uah04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
113250835 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SNF2-rel_dom
SWI2_SNF2
Cas3-like_C_2
DUF3638
NrS1-pol-like_tail
Arg_decarbox_C
Motif
Other DBs
NCBI-GeneID:
113250835
NCBI-ProteinID:
XP_026348460
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MSNGYSADQSFCHLISCFRARVKTYIQVEPVLDYLNFLPDDVKEQIQRTAVNAGNMQAAD
QLLSALEKGGWPPGWARQFLVALQRAGSDLAARYLNPELTDLPSPSSETTHDECLQLLTL
LQPTLVDRLLVRDILDRCMEKKLLTNEDRSRISAAESNGNESGVRELLRRIVQKENWFSE
FLTVLRQTENHALVQELTGTTCFESNAEPENLSQRDGPDVQEAVLSATGQPSPEREGWDE
DCDSLESSLVDSSVVSESDTSLAEGSVSCLDESLGHNSNMGSDSDEENVAERASPEPELH
LRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVP
LVEQLFRKEFEPFLKKWYHTIGLSGDTQLKISFPEVVKTYDVIISTAQILENSLLNSEKG
EDDGVQFSDFSLIVIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKECKPVIPLPQILGL
TASPGVGGAKKQAEAKEHILKICANLDACTIKTVKENIVQLKDQIKEPCKKFAIADDTRE
DPFKDKLLEIMNKIQSFCQMSPMSDFGTQPYEQWTTQMEKKAAREGNRKERVCAEHLRKY
NEALQINDTIRTIDAYNHLEAFYNDEKEKKFAVLEDDSDESGEDGDGDEDEDDVKKPLSL
DRTDRFLMDLFFENRRMLKKLAENPKHENEKLIKLRNTIMEQYTRTEESARGIIFTKTRQ
SAYALSQWITENKKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIAT
TVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSNSGVIEREIVNDF
REKMMYKAIDHVQNMNPEEYARKILELQMQSIMEKKMKIKRSIAKHYKENPSLINFLCKN
CSVLACSGEDIHVIEKMHHVNMTPVFKELYIVRENKALRKKFADYQTNGEIICKKCGQAW
GTMMVHKGLDLPCLKIKNFVVVFKNNTPKKQYKKWVELPITFPDLDYSQYCLCSDED
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggctattctgcagaccagagtttctgccatctcatctcgtgtttcagggcc
agagtgaaaacgtacatccaggtggagcccgttctcgactacctgaactttctgcccgat
gacgtgaaggagcagattcagaggacggccgtcaacgctgggaacatgcaggcagctgat
caacttctgagcgcgctggagaagggaggctggccccccggctgggctaggcagtttctg
gtggccctgcagagagcaggcagcgatttagccgcccgctacctgaacccagagctcacc
gacttgccgtctccatcctctgagaccactcacgatgagtgtctccaactgctgaccctc
cttcagcccaccctggtggacagacttctggtcagagatatcttggataggtgtatggag
aagaaactgttgacaaatgaagacagaagtcggatttctgctgcagaaagcaatggaaat
gaatcaggtgtaagagagctactgagaaggatcgtgcagaaagaaaactggttttctgaa
tttctgactgttctgaggcaaacagaaaaccacgcccttgtccaagagctaacaggcacc
acttgctttgaaagcaatgcagagcctgagaatttatcacaacgagatggccctgatgtt
caagaagcagttctttcagccacaggtcagccaagtccagagagagagggctgggacgag
gattgtgattccctggaatcgtctttggtggattcttctgttgtttcagaatcagacaca
agtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatg
ggaagtgattcagatgaagagaatgtggcagaaagagcatcgcctgagccagaactgcat
ctcaggccttaccaaatggaagtcgcccaaccagccttggaggggaaaaatatcattata
tgcctccctacagggagtgggaaaaccagagtggctgtttacattgccaaggatcacttg
gacaagaagaaaaaggcatctgaacctggaaaagttatagtccttgtcaataaggtgcca
ctagttgaacagctcttccgcaaagagtttgaaccatttttgaagaaatggtatcataca
attggattaagtggtgatacccagttgaaaatatcatttccagaagttgtcaaaacctat
gatgttatcatcagtacagcccaaatccttgaaaattctcttttaaattcagaaaaagga
gaagatgatggtgtccagttttcagacttttccctcatcgtcattgatgaatgccatcac
accaacaaagaagcagtctataataacatcatgaggcgttacttgaaacagaagttgaaa
aacaataaactcaagaaagaatgcaaaccggtgattcccctacctcagatactaggacta
acggcttcaccaggtgttggaggagccaaaaagcaagctgaagccaaggaacacatttta
aaaatatgtgccaatcttgatgcatgtaccattaaaactgtaaaagaaaatattgttcaa
ctcaaagaccaaataaaagagccatgcaaaaagtttgcaatcgcagatgacaccagagaa
gatccatttaaagataaacttttagaaataatgaacaagattcaaagtttttgccaaatg
agtccaatgtcagattttggaactcaaccctatgaacaatggaccactcaaatggaaaaa
aaagctgcccgagaaggaaatcgcaaagaacgtgtttgtgcagagcatttgaggaagtac
aatgaagccctacaaattaatgacacaattcgaacgattgatgcatataatcaccttgaa
gctttctataatgatgagaaagaaaagaagtttgcagtcctagaagatgatagtgatgag
agtggtgaggatggtgatggtgatgaagatgaagatgatgtaaagaaacctttgagcctg
gataggacagatagatttctcatggatttatttttcgaaaacaggagaatgttgaaaaag
ctggctgaaaacccaaaacatgaaaatgaaaagctgatcaaattaagaaacaccataatg
gaacaatatacaaggactgaagaatcggcccgaggaataattttcacaaaaacacgacag
agtgcatatgccctttctcagtggattactgaaaataaaaaatttgcagaagtaggagtc
aaagcccatcatctgattggagctggacacagcagtgagttcaagcccatgacgcagaat
gaacaaaaagaagtcattagtaaattccgcacaggaaaaataaatctgcttatcgctacc
acagtggcagaagaaggtctggatattaaagaatgtaatatcgttatccgttatggtctc
gtcactaacgaaatagccatggtccaggcccgtggtcgagccagagctgatgagagcacc
tacgtcctggttgcccacagtaactcaggagttattgaacgcgagatagttaatgatttc
cgagagaaaatgatgtataaagctatagaccatgttcagaatatgaacccagaggagtat
gctcgtaagattttggaattacagatgcaaagtataatggaaaagaaaatgaaaatcaag
agaagtattgcaaagcactacaaggaaaacccatcactaataaatttcctctgcaaaaac
tgcagtgtgctagcctgctctggagaagatatccatgtcattgagaagatgcaccacgtc
aacatgacgccagtattcaaggaactctacattgtgagagaaaacaaagcactacgaaag
aaatttgcagactatcaaacaaatggcgagattatctgcaaaaaatgtggccaagcttgg
gggacgatgatggtgcacaaaggcttagatttgccttgtctcaaaataaagaattttgta
gtggttttcaaaaataatacgccaaagaaacaatacaaaaagtgggtagaattacctatc
acatttcccgatcttgactattcacaatattgtttgtgtagtgatgaggattga
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