Ustilago maydis: UMAG_02065
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Entry
UMAG_02065 CDS
T01021
Name
(RefSeq) histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
uma
Ustilago maydis
Pathway
uma03082
ATP-dependent chromatin remodeling
uma03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
UMAG_02065
03083 Polycomb repressive complex
UMAG_02065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uma03036
]
UMAG_02065
Enzymes [BR:
uma01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
UMAG_02065
Chromosome and associated proteins [BR:
uma03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
UMAG_02065
HDAC complexes
Sin3A-HDAC complex
UMAG_02065
BRAF-HDAC complex
UMAG_02065
REST complex
UMAG_02065
SHIP complex
UMAG_02065
MiDAC complex
UMAG_02065
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
UMAG_02065
Heterochromatin formation proteins
Other heterochromatin formation proteins
UMAG_02065
Chromatin remodeling factors
NuRD complex
UMAG_02065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
NIL
Motif
Other DBs
NCBI-GeneID:
23562902
NCBI-ProteinID:
XP_011388443
UniProt:
A0A0D1E0Y7
LinkDB
All DBs
Position
5:124969..126678
Genome browser
AA seq
569 aa
AA seq
DB search
MSSTFLASNSIVNTYNGTSASGAPPSADEPLFAPISSSSNPNSSRVCYFFDSDIGNYHYG
PGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMSQFHTDEYVEFLNRVTPDNVD
SFVREQAKFNVGDDCPVFDGLFEYCSISAGGSMEGAARLSRDKCDIAINWAGGLHHAKKG
EASGFCYINDIVLGILELLRYHPRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGEFF
PGTGELRDIGIGKGKMYSCNFPLRDGITDESYKSVFEPVISQIMQHYQPSAVVLQCGSDS
LAGDKLGCFNLSMRGHANCVEYVKSFGLPLLLLGGGGYTMRNVSRAWAFETGLAAGQELN
AQIPVNEYYEYFGPDYRLDVRPNNMQDLNTREYLEKIKIQVFENLRQTAHAPSVQGHVEP
RSIVESMHLQHVNGDMEERIDLGDKNGMQILDDKYPDERLVDTREFQDHSTRADELDRDA
RANPTRIDDAVHARAARPALADSRNPTADPSEHAIDEQIQADAMAKLLAPKPTLQAEHPL
SSSAQPAHTPNSHQPSHSPTPPAPNPPHP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacgtttctcgcgagtaactcgattgtcaacacgtacaacggtacctctgcg
tctggcgcgcctccgtcggcggacgaaccgttgtttgcgcccatctcgtcgtcttccaac
ccgaattcgtcgcgagtatgctactttttcgactcagacattggcaactaccactacggt
cctggccatccgatgaagcctacgcgcatccgaatgtgtcactcgctggtgatgaactac
ggtctatacaagcgcatggagatcttccgagccaaacctgccacgaagcgcgaaatgtcg
cagttccatacggacgagtacgtcgagtttctgaaccgagtgacaccggataacgtggac
tcgtttgttcgagaacaggccaagttcaacgttggcgacgactgtcccgtatttgacggc
ctgttcgagtactgctcgatctcggcgggtgggtcgatggagggagccgcgaggctgtcg
cgcgacaaatgcgatatcgccatcaactgggcgggcggattgcaccatgccaaaaagggc
gaagcaagcggattctgctacatcaacgatatcgttctcggaatcctcgagttgctccgc
taccatccgcgtgttctgtacatcgacattgacgtgcaccacggcgacggtgtcgaagaa
gcgttctacactacggaccgcgtcatgacttgcagctttcacaaatacggcgagttcttc
cctggcacaggcgaactaagggacattggcatcggtaaaggcaagatgtactcgtgcaat
ttcccgcttcgcgacggcatcacggatgagagctacaaaagcgtgtttgaacccgtcatc
tctcagatcatgcagcactaccagccatccgcggtggtgcttcagtgcggtagcgattcg
ttggcgggagacaagctgggatgtttcaatctatcgatgcgaggacatgccaactgcgtc
gagtacgtcaagtcgttcggactaccattgctgttgttgggcggaggcggatatacgatg
cgcaacgtcagtcgcgcctgggcattcgagactggactcgctgccggtcaggagttgaac
gctcaaatcccggtgaacgaatactacgaatactttgggccggactatcggttggatgtt
cggccgaacaacatgcaagacctcaacacgcgcgagtatctggaaaagatcaagatccaa
gtgtttgagaatctgcgtcagacggcacatgcgccttcggtacaggggcatgtggagccg
cgcagtattgtcgagtcgatgcatttgcaacatgtcaacggcgacatggaggagcgcatc
gatttgggcgacaagaacggaatgcagatcttggacgacaagtatcccgacgagcggctt
gtagacacgcgtgagtttcaggaccactctacgcgcgccgacgagttggaccgcgacgcc
agagcgaatccgactcggatcgacgacgctgtccacgctcgtgctgcacgacccgctctg
gcagactctcgcaaccccaccgcagatcctagcgagcacgccatcgatgagcagatccag
gccgacgccatggcgaaactactcgctcctaaacccaccctacaagccgagcatccgctc
tcgtcatccgctcaacccgcccacacccctaacagccaccaaccatcacactccccaaca
ccacccgcccccaatccgccacacccataa
DBGET
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