Ustilago maydis: UMAG_04389
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Entry
UMAG_04389 CDS
T01021
Name
(RefSeq) putative cohesin subunit protein
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
uma
Ustilago maydis
Pathway
uma04111
Cell cycle - yeast
uma04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
UMAG_04389
04113 Meiosis - yeast
UMAG_04389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uma03036
]
UMAG_04389
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
uma00535
]
UMAG_04389
Chromosome and associated proteins [BR:
uma03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
UMAG_04389
Meiosis-specific proteins
Cohesin complex and associated proteins
UMAG_04389
Proteoglycans [BR:
uma00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
UMAG_04389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
COG3_N
AAA_29
FtsK_SpoIIIE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
23564588
NCBI-ProteinID:
XP_011391089
UniProt:
A0A0D1DSI0
LinkDB
All DBs
Position
14:complement(287328..290984)
Genome browser
AA seq
1218 aa
AA seq
DB search
MYIKTLTIQGFKSYRDQTAVEPFSPHHNVVVGRNGSGKSNFFSAIRFVLSDAYTSMSREE
RQSLLHDSSSSTSATLSAFVEIVFDNSDNRFPTNGTEVILRRTIGLKKDEYSIDRKSASK
ADVANLLESAGFSRSNPYYIVPQGRITHLTNAKDHERLGLLKEVAGTRVYEQRRAESLKI
MEDTSAKRSKIDDLLKYIESRLRELDDEKEELREYYEKDRERRCIEYSLHQRELAECAEL
LEKLEEERRRDVDASNLRRSEFNEREKLLARLEAELAETGQTIEQRTLEKNQLEHERRDV
AKHLAQIESLVEELEEVGEKRADRRGALETELARIRVEIQQKQAQLEQLRPHLDALHAQA
EQLRTALEETKARVSALYSKQGRSAQFRNQQDRDEYLRSKIGSLDQFLRSQQMRMDETGR
ERASIIEQRNATLRKIQETEESLESRKDTVQQLANEYAAKRDRRDELSEIRKDLWKEEES
LRSSLAFAGTELSNAQRKLVGMMDKATVQGLLSVEKTAEQLGLKDNVKGPIYQLFSVDDT
YKTPVEVVAGASLFHVVVDTDETASRLLEVMNREKSGRVTFMPLNRLRPKEIDFATTQDA
VPIVKKLRFDKALTPAFQQIFGRSIVCQNLEIAAAYVRSHGVNAVTLDGDKVERKGALSG
GYQDPRRSRLDAVMDVRKWKTQSEADTAKQDEVRRRLTEIEQEITSLMGEMYTLQHRRDE
ARNSRGPLTDQLQRARVEAEDLAQRLHSIERREADQSLELKAAQTERAGLQEELSTPMSQ
GLTTQEAAQLETLHSRQDLQKRELADKSNALSELENQRSMLEIDLDENLRRRQEEIGMQL
EALGESLGGDDAATASGTQDVSARKREIEALRRRIAEREKRIKAIETELDHLSQSIQDTQ
AKYEKTKADQAEDARSIARQQKNVERYLSKRSRLLEQRDRCNQDIRDLGVLPEEAFEKYI
NTNADKLLKNLHKVNERLKKYSHVNKKAVEQYNSFTKQRDQLLERRGELEQSAESIQELI
DVLDQRKDEAIERTFKQVSKYFEEVFEKLVPAGRGRLIMQRRADIAGGGSGGGGGVADES
EDDGAPVESYTGVSIKVSFNSKLDEGLRIQQLSGGQKSLVALATVFAIQKCDPAPFYLFD
EIDANLDALYRTAVANMIKELAENAQFITTTFRPEMVTVAKKHYGVLFDANKVSSIRSIS
RDEAHEFVEAAATTEPAR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagaccctcaccatccagggcttcaagtcgtatcgagaccagaccgccgta
gagccgttttctccgcatcacaatgtggtcgtcggtcgaaatggttcgggcaagtccaac
ttcttctcggccatccgattcgtgctttctgacgcctacacctccatgtcgcgtgaggaa
aggcagtcgctcctccatgacagctcgagctctacctcggctacgctttctgctttcgta
gaaatcgtgtttgacaatagtgacaaccgcttccccaccaacggtaccgaagtcatcctc
cgaagaaccatcggtctcaaaaaggacgagtatagcatcgaccgcaagtccgcctcgaaa
gccgatgtggccaacctgctcgagtccgccggcttctctcgcagcaacccgtactacatt
gttcctcagggcaggatcacccacctcactaatgcaaaggatcacgagcgtctcggtctg
ctcaaagaagtggccggtacgcgtgtctacgaacagcgccgagccgagtcgctcaagatc
atggaagatacgagtgcaaagcgatccaagatcgatgatctgctcaaatacatcgaaagc
cgtctgcgcgaactcgacgacgaaaaggaggagcttcgcgaatactacgaaaaggaccgc
gagcgcagatgtatcgagtacagcttgcaccagcgcgagcttgccgagtgtgccgagctg
cttgaaaagctcgaagaggagcgtagacgcgacgtcgacgcttccaacctccgacgaagc
gagttcaacgagcgcgaaaagctgctcgcgcgccttgaagcagaactcgccgaaaccggt
cagactatcgagcagcgcacgcttgaaaaaaatcagctcgagcacgagaggcgtgatgtt
gccaagcatcttgcgcagatcgagtcgctcgtcgaagaactcgaagaggtcggcgaaaag
cgtgccgatcgacgcggcgcactcgagaccgaactcgcgcgtatccgtgtcgagatccag
cagaagcaagcgcagctcgagcagcttcgacctcacctcgatgcgctccacgcgcaagcc
gagcagctgcgtaccgccctcgaagagacaaaggcacgagtctcggcactgtactccaag
caaggtcgttcggctcagttccgcaaccagcaggatcgtgacgaatacctgcgatccaag
atcggcagtctcgaccaattcctgcgctcacagcagatgcgcatggacgagaccggtcgc
gaacgtgcaagcatcatagagcagaggaacgcgacgcttcgcaagatccaagagaccgag
gaaagcctcgaaagccgaaaggacacagttcagcagttggccaacgaatacgccgccaag
cgagaccgccgtgacgagctttcggaaatacgcaaggacctgtggaaggaggaagagtcg
ctccgatcttcgctcgcattcgccggtaccgagctttccaacgcacagcgcaaactggta
ggcatgatggacaaggctaccgttcagggtttgctctctgtagaaaagacggccgaacag
ctcggattgaaggacaacgtcaagggtcccatctaccagctgttttcggtggacgacacg
tacaaaacacccgtcgaggtggtcgctggtgcttcgctcttccacgtggttgtcgacacg
gatgaaactgcaagcagactgctcgaagtcatgaaccgcgaaaagagtggtcgcgtcacc
tttatgcctctgaaccgattacgtcccaaggagatcgactttgccacgacgcaagatgcg
gttccgattgtcaagaagcttcggttcgacaaggcactgacgcccgcattccagcagatt
ttcggacgcagcattgtctgccagaacctcgagatcgccgcggcgtacgtgcgcagtcac
ggtgtgaatgcggtcacactggatggtgacaaggttgagcgcaagggagcgctttccggt
ggttaccaggacccaagacgaagtcgactggatgcggttatggatgtacgcaagtggaag
acgcagagcgaggcggacacggccaagcaggatgaggttcgacggcgattgaccgagatc
gagcaggagatcacgagcctgatgggcgaaatgtacacgttgcagcatcgacgcgacgaa
gcgcgaaactcgcgtggtccgctcacggaccagctgcagcgtgcacgtgtcgaggcggaa
gacctcgcgcagcgcctgcacagcatcgaacgtcgcgaagccgaccagagtctcgagctg
aaagcagcacagacggagcgagccggattgcaagaggagctgagcacgcctatgtcacaa
ggtctcaccacgcaagaagctgctcagctcgaaacactgcattcgcgtcaagacctgcag
aagcgtgagctagcagacaagtctaacgcgttgtccgagctcgagaatcaacgctcgatg
ctcgagattgatctggacgagaacctgcgtcgacgacaggaagagattggaatgcagctc
gaggcgctcggcgagtctctaggtggcgacgatgcggctactgcatcaggtacccaggat
gtttcggctcgcaagcgcgagatcgaggcgctccgacgtcgcatcgctgagcgcgaaaaa
cgcatcaaagcgatcgaaactgaactcgatcatctctcgcaatcgatccaagacacacag
gccaagtacgaaaagaccaaagcggaccaggcggaagatgcgcgaagcatcgctcgtcaa
cagaagaacgtagagcgatacctgtcgaaacgctctcgtctgttggaacagcgcgatcgg
tgcaatcaagatattcgcgatctcggcgtcctaccggaagaagcgtttgaaaagtacatc
aacacgaatgcggacaaactgctcaagaacctgcacaaggtcaacgagaggctgaaaaag
tattcgcacgtcaacaagaaggcggtggagcagtacaactcgtttaccaagcagcgcgat
cagctgttggagcgcaggggcgagctcgagcagagcgccgagagcatccaggagttgatc
gatgtgttggaccagaggaaggacgaggcgatcgagcgcacgttcaagcaggtgagcaag
tactttgaagaggtgtttgaaaagctcgtccctgccggacgcggacgcttgatcatgcag
cgacgagccgacatcgctggcggcggcagtggcgggggcggcggtgtcgccgacgagtcc
gaggacgatggcgcaccagtagagtcgtatacgggcgtctcgatcaaggtgagcttcaac
tcgaagctcgacgaaggactgcgtattcaacagctgtccggcggacagaaatcgctcgtc
gctttggctactgtatttgccattcaaaaatgcgatcctgcaccgttctacttgttcgac
gagatcgacgcgaatctcgatgcactttaccggaccgcagtggccaacatgatcaaggag
ctcgctgagaacgcgcagtttatcacaactacgttcagacccgagatggtgacagtggcc
aagaagcactacggtgtgctgttcgatgctaacaaggtcagcagtatcaggagtattagt
agggacgaggcgcatgagtttgtcgaggcggcggctactactgagcctgctcgttga
DBGET
integrated database retrieval system