Ursus maritimus (polar bear): 103671242
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Entry
103671242 CDS
T03271
Gene name
MSH6
Definition
(RefSeq) mutS homolog 6
KO
K08737
DNA mismatch repair protein MSH6
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr01524
Platinum drug resistance
umr03430
Mismatch repair
umr05200
Pathways in cancer
umr05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103671242 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103671242 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
103671242 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
103671242 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
umr03400
]
103671242 (MSH6)
DNA repair and recombination proteins [BR:
umr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103671242 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
UPF0524
Motif
Other DBs
NCBI-GeneID:
103671242
NCBI-ProteinID:
XP_008698065
UniProt:
A0A384CUA4
LinkDB
All DBs
Position
Un
AA seq
1260 aa
AA seq
DB search
MEGYPWWPCLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEV
QKGGHFYSSKPEILRAMQRADEALNKDKIERLKLAVCDEPSEPEEEEEMEVGATYSSDKS
EEDNEVESEEEVQPKVQGSRRSSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDELS
SGVGDSDSEGLDSPVKVASKRKKMVTGNGSLKRKSSRKEMPLATKRSTGISSETKSALNA
FSAPQNSESQAHIGGGCDDSSRPTVWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVP
EDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHS
GFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITK
GTQTYSVLEGDPSENYSKYLLSLKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFSDDRHC
SRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLE
EGYFKEKLNEDSGVMLPQVLKGMTSESDSLGLTPGEKSELALSALGGCIFYLKKCLIDQE
LLSMANFEEYIPLDSDMVSATGPGAFFAKANQRMVLDAVTLNNLEIFMNGTNGSTEGTLL
EKIDTCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKISDVVDLLKKLPDLE
RLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEDV
DNFKSKILKQVVTLQTKTPEGRFPDLTLELNRWDTAFDHEKARKTGLITPKAGFDSDYDQ
ALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKST
KKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDV
LLCLANYSRGGDGPMCRPVILLPEEGTPPFLDLRGSRHPCIMKTFFGDDFIPNDILIGCE
EEENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGAS
DRIMSGESTFFVELSETASILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIK
CRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGF
NAARLANLPEEVIQKGHRKAREFEKMTQSLRLFREVCLASERSTVDAEAVPKLLALIKEL
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggagggttacccctggtggccttgcctggtttacaaccacccttttgatggaacattc
atccgtgagaaagggaagtctgttcgagttcatgtacagttttttgatgacagcccaaca
aggggctgggttagcagaaggctattaaagccatatacaggttcaaaatcaaaggaagtg
caaaaaggaggtcatttttacagttcaaagcctgaaatactcagagcaatgcaacgtgca
gatgaagccttgaataaagacaagattgagaggctaaaattggcagtgtgtgatgagccc
tcagaaccagaggaagaagaagagatggaggtaggtgcaacttactcatcagataagagt
gaagaagataatgaagttgaaagtgaagaggaagtacagcctaaggtccaaggatctagg
cgaagtagccgccaaataaaaaaacgaagggtcatatcagactctgagagtgacattggt
ggctctgatgtggaattcaagccagatgctaaggaggaaggaagtagtgatgaactaagc
agtggggtgggggatagtgacagtgaaggcctggacagtcctgtcaaagttgcttcaaag
cggaagaaaatggtgactggaaatggctctctcaaaaggaaaagttcaaggaaggaaatg
cccttggccaccaaacgatcaactggcatttcgtcagaaaccaagagtgctttgaatgct
ttctctgcccctcaaaattctgaatctcaagcccacattggtggaggatgcgatgatagt
agtcgccccactgtctggtatcatgaaactttagagtggctcaaggaggaaaagaggaga
gatctacacaggaggcgacctgatcaccctgattttgatgcatccacactctatgttcct
gaggatttccttaactcctgtactcctggcatgaggaagtggtggcagattaagtctcag
aactttgatcttgttatattttataaggtggggaagttttatgagctgtaccacatggat
gctcttattggagtcaacgaactaggtctggtattcatgaaaggcaactgggctcattct
ggtttccctgaaattgcatttggccgatattccgattctctggttcagaaaggttataaa
gtagcacgagtggaacagactgagacccctgaaatgatggaggcacgatgccggaagatg
gcacatatatctaagtatgacagagtggtgaggagggagatctgtagagttattaccaag
ggtacacagacctacagtgttttggaaggtgacccctctgagaactacagtaagtatctt
cttagcctcaaagaaaaagaggaggattcttctggccacactcgggtgtatggagtatgc
tttgttgatacctcactgggaaagtttttcataggtcagttttcagatgatcgccattgc
tccagatttaggactctggtggcacactatcctccagtacaagtcctatttgagaaagga
aatctctcaacagaaactaagatgattctgaagggttcactatcctcctctcttcaggaa
ggtctgataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaa
gaaggatattttaaggaaaagttaaatgaggacagtggggtgatgttaccccaggtgctt
aaaggtatgacctcagagtctgattctcttgggttgacaccaggagagaagagtgaattg
gccctgtctgctctaggtggttgtatcttctacctcaaaaaatgtcttattgatcaagag
cttttatcaatggctaattttgaagaatacattcccttggattctgacatggtcagtgct
acaggacctggtgctttttttgctaaagccaatcaacgaatggtgctagatgctgtgaca
ttaaacaacttagagattttcatgaatggaacaaatggttctactgaagggaccctgcta
gaaaagattgatacttgccatactccctttggtaagcggcttctaaagcagtggctttgt
gccccactctgtagcccttatgctatcaatgatcgtctagatgctatagaagatctcatg
gttgtgcctgacaaaatctctgatgtggtagaccttctaaagaagcttccggaccttgag
aggctgctgagtaaaattcataatgttgggtctcccctgaagagccaaaaccacccagat
agcagggctatcatgtatgaagaaactacatacagcaaaaaaaagattattgattttctt
tctgctctagaaggattcaaagtaatatgtaaaattatagagattatggaagaagacgtt
gacaactttaagtctaaaatccttaagcaggttgttactctacagacaaaaacccctgag
ggccgttttccagatttgactctagagctgaaccgatgggatacagcctttgatcatgaa
aaggctcgaaagactggactaattactcccaaagcaggatttgactctgattatgaccaa
gctcttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgt
agtcgaataggctgtaggaccattgtctactgggggatcggtaggaaccgttatcagttg
gaaattccagagaattttatcactcgtaatttgccagaagaatatgagttgaaatctacc
aagaagggctgtaagcggtactggaccaaaactattgagaagaagttggctaatctgata
aatgctgaagaacggagagatacatcattgaaggactgcatgcggcgactgttctataac
ttcgataaaaattacaaggactggcagtctgctgttgagtgcatcgcagtattggatgtg
ttattgtgcctggctaactacagtcgagggggtgatggccctatgtgtcgtccagtaatt
ctgttgccagaagaaggcactcctcccttcttagaccttagaggatcacgtcatccctgc
attatgaagactttttttggagatgactttataccaaatgacattctgataggctgtgag
gaagaggaaaatggcaaagcttactgtgtgcttgtcactggacctaacatggggggcaag
tcgacgctcatgagacaggctggcctgttagctgtaatggcccagacgggttgttacata
cctgctgaagtgtgtaggctcacaccaattgatagagtatttactagacttggtgcctca
gacagaataatgtcaggtgaaagtacattttttgtggagttgagtgaaactgccagtata
cttacgcatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatggaacagcaatagcaaatgcggttgttaaagaacttgctgagaacataaag
tgtcgtacactgttttctacccactaccactcattagtagaagattattctcaaaatgtt
gcagttcgcctgggccacatggcatgcatggtagaaaatgaatgtgaggatcccagccag
gagactattaccttcctctataaattcattaagggagcttgtcctaaaagctatggcttt
aatgcagcaaggcttgccaaccttccagaggaggttattcaaaagggacatagaaaagca
agagaatttgaaaagatgactcaatcactgcgattatttcgggaagtttgcctggctagt
gaaaggtcgactgtagatgctgaagctgtccctaaattgctggctttgattaaggaatta
tag
DBGET
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