KEGG   Ursus maritimus (polar bear): 103671242
Entry
103671242         CDS       T03271                                 
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr01524  Platinum drug resistance
umr03430  Mismatch repair
umr05200  Pathways in cancer
umr05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:umr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    103671242 (MSH6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    103671242 (MSH6)
  09162 Cancer: specific types
   05210 Colorectal cancer
    103671242 (MSH6)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    103671242 (MSH6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:umr03400]
    103671242 (MSH6)
DNA repair and recombination proteins [BR:umr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     103671242 (MSH6)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP WPP HORMA UPF0524
Other DBs
NCBI-GeneID: 103671242
NCBI-ProteinID: XP_040479434
UniProt: A0A8M1FFF4
LinkDB
Position
Unknown
AA seq 1359 aa
MSRQSTLYSFFPKSPALTNANKASVRAPGEGGGAAAAATGASRSPGGDAAWSEAEPGPLA
GSASPPESRNINGGLRRSAAPAVPASSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEVQKGGHFYSSKPEILRAMQRAD
EALNKDKIERLKLAVCDEPSEPEEEEEMEVGATYSSDKSEEDNEVESEEEVQPKVQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDELSSGVGDSDSEGLDSPVKVASKR
KKMVTGNGSLKRKSSRKEMPLATKRSTGISSETKSALNAFSAPQNSESQAHIGGGCDDSS
RPTVWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSTETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFKEKLNEDSGVMLPQVLK
GMTSESDSLGLTPGEKSELALSALGGCIFYLKKCLIDQELLSMANFEEYIPLDSDMVSAT
GPGAFFAKANQRMVLDAVTLNNLEIFMNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCA
PLCSPYAINDRLDAIEDLMVVPDKISDVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEDVDNFKSKILKQVVTLQTKTPEG
RFPDLTLELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDTSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVIL
LPEEGTPPFLDLRGSRHPCIMKTFFGDDFIPNDILIGCEEEENGKAYCVLVTGPNMGGKS
TLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASIL
THATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVA
VRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAR
EFEKMTQSLRLFREVCLASERSTVDAEAVPKLLALIKEL
NT seq 4080 nt   +upstreamnt  +downstreamnt
atgtctcgacagagcacgctgtacagcttcttccccaagtctccagcgctgactaatgct
aataaggcctcggtcagggcgccaggtgaaggcggcggcgccgccgctgctgccaccggg
gcctcccgttctcccggcggggatgcggcctggagcgaggccgagcctgggcccttggca
ggctccgcgtcgccgccggagtcgaggaacatcaacggagggctgcggagatctgccgcc
cctgcggtccctgccagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttacccctggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaagggaagtctgttcgagttcatgtacagttttttgatgacagcccaacaagg
ggctgggttagcagaaggctattaaagccatatacaggttcaaaatcaaaggaagtgcaa
aaaggaggtcatttttacagttcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattgagaggctaaaattggcagtgtgtgatgagccctca
gaaccagaggaagaagaagagatggaggtaggtgcaacttactcatcagataagagtgaa
gaagataatgaagttgaaagtgaagaggaagtacagcctaaggtccaaggatctaggcga
agtagccgccaaataaaaaaacgaagggtcatatcagactctgagagtgacattggtggc
tctgatgtggaattcaagccagatgctaaggaggaaggaagtagtgatgaactaagcagt
ggggtgggggatagtgacagtgaaggcctggacagtcctgtcaaagttgcttcaaagcgg
aagaaaatggtgactggaaatggctctctcaaaaggaaaagttcaaggaaggaaatgccc
ttggccaccaaacgatcaactggcatttcgtcagaaaccaagagtgctttgaatgctttc
tctgcccctcaaaattctgaatctcaagcccacattggtggaggatgcgatgatagtagt
cgccccactgtctggtatcatgaaactttagagtggctcaaggaggaaaagaggagagat
ctacacaggaggcgacctgatcaccctgattttgatgcatccacactctatgttcctgag
gatttccttaactcctgtactcctggcatgaggaagtggtggcagattaagtctcagaac
tttgatcttgttatattttataaggtggggaagttttatgagctgtaccacatggatgct
cttattggagtcaacgaactaggtctggtattcatgaaaggcaactgggctcattctggt
ttccctgaaattgcatttggccgatattccgattctctggttcagaaaggttataaagta
gcacgagtggaacagactgagacccctgaaatgatggaggcacgatgccggaagatggca
catatatctaagtatgacagagtggtgaggagggagatctgtagagttattaccaagggt
acacagacctacagtgttttggaaggtgacccctctgagaactacagtaagtatcttctt
agcctcaaagaaaaagaggaggattcttctggccacactcgggtgtatggagtatgcttt
gttgatacctcactgggaaagtttttcataggtcagttttcagatgatcgccattgctcc
agatttaggactctggtggcacactatcctccagtacaagtcctatttgagaaaggaaat
ctctcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaaggt
ctgataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
ggatattttaaggaaaagttaaatgaggacagtggggtgatgttaccccaggtgcttaaa
ggtatgacctcagagtctgattctcttgggttgacaccaggagagaagagtgaattggcc
ctgtctgctctaggtggttgtatcttctacctcaaaaaatgtcttattgatcaagagctt
ttatcaatggctaattttgaagaatacattcccttggattctgacatggtcagtgctaca
ggacctggtgctttttttgctaaagccaatcaacgaatggtgctagatgctgtgacatta
aacaacttagagattttcatgaatggaacaaatggttctactgaagggaccctgctagaa
aagattgatacttgccatactccctttggtaagcggcttctaaagcagtggctttgtgcc
ccactctgtagcccttatgctatcaatgatcgtctagatgctatagaagatctcatggtt
gtgcctgacaaaatctctgatgtggtagaccttctaaagaagcttccggaccttgagagg
ctgctgagtaaaattcataatgttgggtctcccctgaagagccaaaaccacccagatagc
agggctatcatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttct
gctctagaaggattcaaagtaatatgtaaaattatagagattatggaagaagacgttgac
aactttaagtctaaaatccttaagcaggttgttactctacagacaaaaacccctgagggc
cgttttccagatttgactctagagctgaaccgatgggatacagcctttgatcatgaaaag
gctcgaaagactggactaattactcccaaagcaggatttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgtagt
cgaataggctgtaggaccattgtctactgggggatcggtaggaaccgttatcagttggaa
attccagagaattttatcactcgtaatttgccagaagaatatgagttgaaatctaccaag
aagggctgtaagcggtactggaccaaaactattgagaagaagttggctaatctgataaat
gctgaagaacggagagatacatcattgaaggactgcatgcggcgactgttctataacttc
gataaaaattacaaggactggcagtctgctgttgagtgcatcgcagtattggatgtgtta
ttgtgcctggctaactacagtcgagggggtgatggccctatgtgtcgtccagtaattctg
ttgccagaagaaggcactcctcccttcttagaccttagaggatcacgtcatccctgcatt
atgaagactttttttggagatgactttataccaaatgacattctgataggctgtgaggaa
gaggaaaatggcaaagcttactgtgtgcttgtcactggacctaacatggggggcaagtcg
acgctcatgagacaggctggcctgttagctgtaatggcccagacgggttgttacatacct
gctgaagtgtgtaggctcacaccaattgatagagtatttactagacttggtgcctcagac
agaataatgtcaggtgaaagtacattttttgtggagttgagtgaaactgccagtatactt
acgcatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgcaaca
tttgatggaacagcaatagcaaatgcggttgttaaagaacttgctgagaacataaagtgt
cgtacactgttttctacccactaccactcattagtagaagattattctcaaaatgttgca
gttcgcctgggccacatggcatgcatggtagaaaatgaatgtgaggatcccagccaggag
actattaccttcctctataaattcattaagggagcttgtcctaaaagctatggctttaat
gcagcaaggcttgccaaccttccagaggaggttattcaaaagggacatagaaaagcaaga
gaatttgaaaagatgactcaatcactgcgattatttcgggaagtttgcctggctagtgaa
aggtcgactgtagatgctgaagctgtccctaagttgctggctttgattaaggaattatag

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