Usitatibacter palustris: DSM104440_00140
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Entry
DSM104440_00140 CDS
T06995
Symbol
fadJ_1
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
upl
Usitatibacter palustris
Pathway
upl00071
Fatty acid degradation
upl00362
Benzoate degradation
upl00650
Butanoate metabolism
upl01100
Metabolic pathways
upl01120
Microbial metabolism in diverse environments
upl01200
Carbon metabolism
upl01212
Fatty acid metabolism
Module
upl_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DSM104440_00140 (fadJ_1)
09103 Lipid metabolism
00071 Fatty acid degradation
DSM104440_00140 (fadJ_1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DSM104440_00140 (fadJ_1)
Enzymes [BR:
upl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DSM104440_00140 (fadJ_1)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
F420_oxidored
NAD_binding_7
Pyr_redox_2
ApbA
Pyr_redox
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QJR13357
UniProt:
A0A6M4H631
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Position
complement(149186..151300)
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AA seq
704 aa
AA seq
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METKSNTAHYEVRGDIALITFDNPPVNGLGHPVRTAVVAGIEKALADPKVTAIVVTGAGK
AFSGGADIKEFGGPKALAEPTLHTMIRVAETATKPVIVAIHTVCMGGGLEFSLGCHFRVA
SPGAQIALPEVKLGLIPGAGGTQRLPRVVGLETALNMIASGAPVASEQLGVPTKERPTAL
FDEIIEGDLIEGALAFARKVVAEKRPLKLVRDLKVTHPNAEAFVQFAKNSVTAVAKNFPA
PLKCVEVVAASLTMPFEAGMRLERETFLALMMTPESRALRHAFFAERAASKIPDIPEDTK
PRKIEKVGVIGAGTMGGGIAMNFLNAGIPVTILETKQEALDRGLATIRKNYEGTVKKGKL
TADKMESRMALLKPTLSYDDLKDADLIIEAVFEEIGVKEQVFKKLDEVAKPGAILASNTS
TLDVDKIASFTKRPGDVVGMHFFSPANVMKLLEVVRGKKSAPDVMATVMQVGKKIKKTAV
VSGVCDGFIGNRMLKFYGRQANDLVEEGASPQQVDRAMEKFGFAMGPFRVADLAGNDIGW
SIRKRLYAENANTPKQPIADKICEMGRFGQKTGAGWYRYEPGKRDAIPDPVVDKVIEEVR
KANGVTPRKISDEEIVERCIYALVNEGARIVEECIAARASDVDMVYLTGYGFPLHRGGPM
LYADQVGLPNVERAMKKYEKQTGDAFWKPAAILSKLAAEGKNFN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacgaaatcgaacaccgcgcactatgaagtccggggcgacatcgccctgatcacc
tttgacaacccgcccgtcaacggcctgggccatccggtccgcaccgccgtggtcgcgggc
atcgagaaggcgctggccgatccgaaggtcacggcgatcgtcgtgacgggagcgggcaag
gcgttctcgggcggcgccgacatcaaggagttcggcggaccgaaggcgctcgccgagccc
acgctgcacacaatgatccgtgtcgccgagacggcgaccaagcccgtgatcgtcgcgatc
cacacggtgtgcatgggcggcggcctcgagttctcgctcggctgccacttccgcgtggcc
tcccccggtgcgcagatcgcgctgccggaagtgaagctcggtctcatccccggcgcgggc
ggcacgcagcggctgccgcgcgtcgtgggcctggagacggcgctcaacatgattgcgtcg
ggcgcaccggttgcgtctgaacaactgggagtgcccaccaaggaacggcccacggcgctc
ttcgacgaaatcatcgagggcgacctgatcgagggcgccctggccttcgcacgcaaggtg
gtcgccgagaagcggccgctgaagctcgtgcgcgacctcaaggtcacgcacccgaacgcc
gaagccttcgtgcagttcgcgaagaacagcgtgaccgcggtcgcgaagaacttccccgcg
ccgctcaaatgcgtggaggtcgttgccgcctcgctcaccatgccgttcgaggcgggcatg
cgcctcgaacgcgagacgttcctggcactcatgatgacgcccgagtcgcgcgccctgcgc
cacgcgttcttcgccgagcgcgccgcctccaagatccccgacattcccgaagacaccaag
ccgcgcaagatcgagaaggtcggcgtgatcggcgcgggcacgatgggcggcgggatcgcg
atgaacttcctcaacgcgggcattcccgtgacgatcctcgagaccaagcaggaggcgctc
gaccgcgggctagcgacgatccgcaagaactacgagggcacggtgaagaagggcaagctc
accgccgacaagatggaaagccgcatggcgctgctgaagcccacgctctcctacgacgac
ctcaaggacgcggatctcatcatcgaggcggtgttcgaggagatcggcgtgaaggagcag
gtcttcaagaagctcgatgaagtcgccaagcccggcgccattctcgcctcgaacacgtcc
acgctcgacgtggacaagatcgcgtccttcaccaagcgccccggcgacgtggtgggcatg
cacttcttcagtccggccaacgtgatgaagctgctcgaagtcgtgcgcggcaagaagagc
gcgcccgacgtgatggccaccgtgatgcaggtcgggaagaagatcaagaagaccgctgtg
gtgtcgggcgtgtgcgacggcttcatcggcaaccggatgctcaagttctacggccgccag
gcgaacgaccttgtcgaggaaggcgcttccccccagcaggttgaccgcgcgatggagaag
ttcggtttcgcaatgggccccttccgcgtggccgacctcgccggcaacgacatcggctgg
tcgattcgcaagcgcctctatgcggagaacgcgaacacacccaagcagcccatcgccgac
aagatctgcgagatgggccgcttcggacagaagacgggggccggctggtatcgctacgaa
ccgggcaagcgcgatgcgattcccgatccggtcgtcgacaaggtgatcgaggaagtacgc
aaggccaacggtgtgaccccgcgcaagatcagcgacgaggaaatcgtggagcgctgcatc
tatgcgctggtgaacgaaggcgcgcgtatcgtggaggaatgcatcgccgctcgcgcttcc
gacgtggacatggtttacctcaccggctacggtttcccgctgcaccgcggcggcccgatg
ctttacgccgaccaggtggggctgcccaacgtcgagcgcgcgatgaagaaatacgagaag
cagaccggcgacgcgttctggaaacccgccgcgatcctttccaagctcgccgccgaaggc
aagaacttcaattag
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