Usitatibacter rugosus: DSM104443_00127
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Entry
DSM104443_00127 CDS
T06990
Symbol
fadB_1
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
uru
Usitatibacter rugosus
Pathway
uru00071
Fatty acid degradation
uru00362
Benzoate degradation
uru00650
Butanoate metabolism
uru01100
Metabolic pathways
uru01120
Microbial metabolism in diverse environments
uru01200
Carbon metabolism
uru01212
Fatty acid metabolism
Module
uru_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DSM104443_00127 (fadB_1)
09103 Lipid metabolism
00071 Fatty acid degradation
DSM104443_00127 (fadB_1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DSM104443_00127 (fadB_1)
Enzymes [BR:
uru01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DSM104443_00127 (fadB_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
Pyr_redox_2
NAD_binding_7
Pyr_redox
ApbA
DAO
NAD_Gly3P_dh_N
TrkA_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QJR09091
UniProt:
A0A6M4GPF4
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All DBs
Position
complement(136341..138434)
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AA seq
697 aa
AA seq
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MEKSNTARYETKGDVALITFDNPPINGLGHSVRTAVVAGLDKANADPAIKAIVVTGAGRA
FSGGADIKEFGTPKAAAEPTLHTMIRVAEASPKPVIAAIHTVCMGGGLEFSLACHFRIAS
PGAQIALPEVKLGLVPGAGGTQRLPRAVGLEAAVNMIVSGNPVPSEKLKGTALFDEIIEG
DLTTGAIAFAQKVVAEKRPLKKVRDMKVTHPAAEAFLDFAQTSVKAVAKNFPAPAKCVEA
IAASVDKPFEEGLKIEREIFLGLMQSPESRALRHAFFAERAAAKIPDIPEDTAVRKIEKV
AVIGAGTMGGGIAMNFLNAGIPVTILETKQEALDRGLATIRKNYEGTVKKGRLTADKMEQ
RLGLLKPTLSYDDLKDADLIIEAVFEEIGVKEQVFKKLDEVAKPGAILASNTSTLDVDKI
AAFTKRPQDVVGMHFFSPANVMKLLEVVRGKRSAPDVMATVMGIGKKIKKTSVVSGVCDG
FIGNRMLKYYGRQANELVEEGASPQQVDRAMEKFGFAMGPFRVADLAGNDIGFAIRKRLY
AEDPKSKKLPIADAICELGRFGQKTGAGWYRYEPGKRDALPDPVVDKVIEDVRRAQGITP
RKISDEEIVERCVYALVNEGARIVEEGIAQRASDVDMVYLTGYGFPLFRGGPMLYADMVG
LPNVVRAMERFRVQTKDEFWKPAALLSRLAADGKTFN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagagcaacacggcacgctatgaaacaaagggcgacgtcgccctgatcacgttc
gacaacccgccgatcaacgggctcggccactcggtacgcaccgcggtcgtcgccggcctg
gacaaggcgaacgcggacccggcgatcaaggcgatcgtcgtcaccggcgccggccgcgcg
ttttcgggcggtgcggacatcaaggaattcggcacgccgaaggcggccgcggagcccacg
ctccacacgatgattcgcgtcgcggaggcctcgcccaagccggtgatcgccgcgatccac
acggtgtgcatgggcggtgggctcgagttctcgctcgcctgccacttccgcatcgcctcg
cctggggcgcagatcgcgctgccggaggtgaagctgggcctggtgccgggcgccggcggc
acgcagcgcctgccgcgcgcagtggggctcgaggcggcggtgaacatgatcgtctcgggc
aatccggttccgtcggagaagctgaagggcacggcgctcttcgacgagatcatcgagggt
gatctcaccaccggcgccatcgcgttcgcccaaaaggtggtcgccgagaagcggccgctg
aagaaggtgcgcgacatgaaggtcacgcatcccgcggccgaggcgttcctcgatttcgcc
cagacgagcgtgaaggcggtcgcgaagaacttcccggcgcccgcgaaatgcgtcgaggcc
attgccgcctccgtggacaagccgttcgaggaaggcctcaagatcgagcgcgagatcttc
ctgggcctcatgcagtcgccggaatcgcgggcgctgcgccacgcgttcttcgccgagcga
gccgccgcgaagatccccgacatccccgaggacacggcggttcgcaagatcgagaaggtg
gcggtcatcggcgccggcaccatgggtggcggcatcgccatgaacttcctcaacgccggc
atcccggtgacgatcctcgagacgaagcaggaggcgctcgaccgcggccttgccacgatc
cgcaagaactacgagggcacggtgaagaagggccggctcaccgcggacaagatggagcag
cgcctgggcctgctgaagcccacgctctcgtacgacgacctcaaggatgcggacctcatc
atcgaggccgtgttcgaggagatcggcgtgaaggagcaggtgttcaagaaattggatgag
gtcgccaagcccggcgccatcctcgcctccaatacgtccacgctcgacgtcgacaagatc
gccgcgttcaccaagcgcccgcaggacgtggtcggcatgcacttcttcagccccgccaac
gtgatgaagcttctcgaagtggtccgcggcaagaggagcgcgcccgatgtgatggccacc
gtgatgggcatcggcaagaagatcaagaagacctccgtcgtctccggtgtgtgcgacggc
ttcatcggcaaccgcatgctgaagtactacggccgccaggcgaacgagctggtggaggaa
ggcgcctcgccccagcaggtggaccgcgcgatggagaagttcggcttcgccatgggcccg
ttccgcgtggccgacctcgcgggcaacgacatcggcttcgccatccgcaagcgcctctac
gccgaagacccgaagtcgaagaagctgccgatcgccgacgcgatctgcgagctgggccgc
ttcggccagaagaccggcgccggctggtaccgctacgagccgggcaagcgcgacgcgctc
cccgatccggtggtcgacaaggtgatcgaggacgtccgcagggcccagggcatcacgccg
cgcaagatcagcgacgaggagatcgtcgagcgctgcgtctacgcgctggtgaacgagggg
gcccgcatcgtcgaggaaggcatcgcgcagcgcgcctccgacgtcgacatggtctacctc
acgggctacggctttccgctcttccgcggcgggccgatgctctatgcggacatggtggga
ttgccgaatgtggtgcgggcgatggagcggttccgggtgcagacgaaagatgaattctgg
aagcccgccgccctgctctctcgcctcgcggcagacggcaagaccttcaactga
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