Vibrio alfacsensis: D1115_16830
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Entry
D1115_16830 CDS
T05841
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vaf
Vibrio alfacsensis
Pathway
vaf02020
Two-component system
vaf02040
Flagellar assembly
vaf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D1115_16830
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
D1115_16830
09142 Cell motility
02040 Flagellar assembly
D1115_16830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vaf02022
]
D1115_16830
02035 Bacterial motility proteins [BR:
vaf02035
]
D1115_16830
Two-component system [BR:
vaf02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
D1115_16830
Bacterial motility proteins [BR:
vaf02035
]
Flagellar system
Flagellar assembly proteins
Others
D1115_16830
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA
AAA_2
AAA_16
Mg_chelatase
AAA_3
bpMoxR
MCM
Response_reg
HTH_30
AAA_22
AAA_19
nSTAND3
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
AXY02681
UniProt:
A0A347UV02
LinkDB
All DBs
Position
II:343334..344668
Genome browser
AA seq
444 aa
AA seq
DB search
MMTKTDILLVEPNENLARPVLDVLESAGYCARHSRTGRTALLGESASITLVSSTLPDMGV
REFVACHQKKINSGIVIAIVDQDQGILAAETMKSGATDYLLRPFESNQLLNLLKRVEALG
KPLANIVAESWRSKQVLQLAHRAACTSASVLITGESGTGKEVLARYVHEHSSRLNGPFIA
VNCAAIPESMLEAVLFGHVKGAFTGATGSQSGKFEEANGGTILLDEIGEMSPAVQAKLLR
VLQEREVERVGSHKAIQLDIRVIAATNKDLREEVQKGLFREDLYYRLDVLPLHWPPLRER
REDILPISHFFIEKYQESSRCRLSQDAISALSQYHWPGNIRELENVIQRALVMRHGDYIT
AQDLMLPVEMSSPVTEPEFSSSFNHVEAKKQAEFQFVLDKLRQFGGNRTKTANALGVSTR
ALRYKLAAMREHGIDLQLALGSAA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaaaaacggatattttgctggtagagccaaatgaaaatcttgctcgaccagtt
ctggatgtgttggaaagtgcaggctattgcgctcgacactctcgcactgggagaacggct
ttgctcggagaaagtgcaagcattacgttagtcagttcgaccttacccgacatgggggtc
cgtgaatttgttgcctgtcatcagaagaaaatcaattcagggatcgtcattgctattgtg
gatcaagaccagggcattcttgccgctgagaccatgaaatcaggcgcgacggattatctg
ttacgcccatttgagtcaaaccaattattgaatttacttaagcgtgttgaagcattaggt
aagcctctcgccaatattgtggcggaatcctggcgtagcaaacaagtgcttcagcttgct
catcgtgcagcatgcacgagtgcgagtgtgttgattacaggggaatctggaacaggtaaa
gaagtattagctcgctatgtacacgagcactcctctcgcctcaatggtccttttattgct
gtgaactgtgcggcaatccctgaatccatgctcgaagcggtattattcggtcatgttaaa
ggcgcgtttaccggtgctacgggctcacaaagcggtaaatttgaagaggcaaatggtggc
acgattttacttgatgaaattggtgaaatgtctccagcggtgcaagctaagttgctgcga
gtattgcaagagcgcgaagtcgagcgtgttggtagccacaaagccattcaattagatatt
cgagtgattgcagcaacaaacaaagacttacgagaagaagtccagaaaggtctgttccgt
gaagacctttattaccgtcttgatgttctgccgctgcattggcctccgttacgtgaacgt
agagaagacattctacctatcagtcatttctttattgaaaaatatcaagaaagcagtcga
tgccgactgtctcaagatgcgatttccgctcttagccaataccactggccagggaatatt
cgagagttagagaatgtgattcaacgtgctctcgtcatgcgacatggtgattacatcact
gcacaagacttgatgcttcctgttgagatgtcatctccggttaccgaacctgaattttcc
tcaagctttaatcatgtagaagcgaagaaacaagcggaatttcaatttgtgttagataag
ttacgtcagtttggtggcaatcggactaaaacggcaaacgctttaggggtctcgacccga
gcattacgctataaacttgcagccatgcgtgagcacggtatcgacttacagttggcacta
ggctcagctgcctaa
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