Verticillium alfalfae: VDBG_00274
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Entry
VDBG_00274 CDS
T02227
Name
(RefSeq) zinc knuckle domain-containing protein
KO
K12597
protein AIR1/2
Organism
val
Verticillium alfalfae
Pathway
val03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VDBG_00274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_00274
03016 Transfer RNA biogenesis [BR:
val03016
]
VDBG_00274
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
VDBG_00274
Transfer RNA biogenesis [BR:
val03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
VDBG_00274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
9528782
NCBI-ProteinID:
XP_003008593
UniProt:
C9S567
LinkDB
All DBs
AA seq
692 aa
AA seq
DB search
MDASDEAQPAVSSPAPAILEAQQSSKKRSREVSEEATPLPAAPSPQPESKRQKTAPPSGH
EPAVEISKALGNTVTPTAAEEPNINKATPGPASNTNNSKGQKKTGGKNSAKIFTDETGQQ
FLLPTDPKIIRKKQAADTWHERITRWINALVEQNKDKGPLMTPALCIDMFAHAQSKEKES
KTALHRIKKLQKGGKLDTMVGLALEAVHGPGVSAAGTSQDPISIGDDGEAEDAEEDGEDT
GSGDEETDNTTRPSTSGPSGAASTQGDDDAKRQESAPTASDWASLLGPEAGSAAGQSAAK
AKGDDNRSTQHDEPEVAGYRQIMREDEAEKEQQRYFPGATDICTICAATGHSCMACPNTL
CQFCRGDHFSWNCPGRSRCAKCRQFGHTKSKCKEKLAMALEEGLECAFCGEGDHLENACD
NVWHSCHLQPESLHTVRYIAAFCSYCGCEGHYSSDCPAGDQQPFPQKWTATWSLKDRDLC
VDANATDESIARFGVAAESNDPGMHVRGAAAAAKRTHIFYSDSDGSEEGEFLSEKVKPRA
APGQMRMSTNIQFNSTMPSTAFAGQPPLPPGPPPPGPPPGNPGSYSRMATSYGAQLHALP
PRPPAPGQPPSGPGAQRSGYHNVPPPKGPAAQPKNKAKGKNIPQSHKKRAAMQQQQPPPQ
SQGSSQQQHGSRANQRRGNGTSRRPRRGGKQG
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctctgacgaggcccagcctgcggtcagctctccggcacccgccattcttgag
gcccagcagtcctcgaagaagcgatcacgggaagtgagtgaagaggcgacccctctccct
gcggcaccatctcctcagcctgagtccaagcgtcaaaagactgcgccgccttctggtcac
gagccggcagtggaaatcagcaaggcgctgggaaacacagttacgccaacagccgcagag
gaaccaaacataaataaggccacgccagggcccgcctcgaacacgaacaactccaagggg
caaaagaagacgggaggcaagaattctgccaagatcttcacagacgagactggccaacaa
ttcctgctgcccacggatccgaagatcattcgtaagaagcaggccgctgacacgtggcat
gagcgcatcaccagatggatcaatgctcttgtagagcagaacaaggataaggggcccctc
atgacaccagcactctgtattgatatgttcgcgcacgcccagagcaaggagaaggaaagc
aagacggcactacaccggatcaaaaagctgcagaaagggggcaagttggacacgatggtg
ggcctcgcgctcgaggctgtgcatggacccggggtttctgccgcaggaacatcgcaggat
cccatctcaattggtgatgatggcgaggccgaagatgcagaagaagacggagaggacacg
ggcagcggggacgaggagacagataacacgacacgcccgtcgacatctggtccttctggc
gcagcttctacccagggcgacgacgacgcgaaacggcaagagtcggcgccaacagcaagc
gattgggcgtcactgctcgggcccgaagcggggagcgccgcagggcagagcgccgcaaag
gccaaaggcgacgacaacaggagcacacagcacgacgagccagaagtggctgggtaccgg
cagatcatgagagaagacgaggccgagaaggagcagcagcggtattttcctggcgcgact
gacatctgcacgatttgcgcggccactggccactcgtgcatggcctgtccaaacactctc
tgccagttctgtcggggtgatcacttttcgtggaactgcccgggacgatcaaggtgcgcc
aagtgccgacagtttggccacaccaagtccaagtgcaaggagaagctggccatggcgctc
gaggagggcctcgagtgcgctttttgcggcgagggtgaccacctggagaatgcctgcgac
aacgtctggcactcatgccacctccagccagagagcttgcacacggtgcgttacattgcg
gcgttctgcagctactgcgggtgcgagggacattactcgtcagactgcccggcgggcgac
cagcagccgtttccgcaaaagtggacggcgacttggtcgttgaaagaccgcgatctctgt
gttgacgcgaatgcgacggacgagtcgatcgcgcggtttggcgtggcggcggagagcaac
gatcctggcatgcatgtgaggggcgcggcggcggccgccaagcgaacgcacatcttctac
tctgatagcgacgggtcggaggagggcgagttcctcagcgagaaggttaagccacgggcg
gcaccaggccagatgcgcatgtcgaccaacattcagttcaactcgaccatgccgagcaca
gcctttgcgggccagcctcccctgccgcctggaccgcccccgccaggcccgccaccgggc
aaccctgggtcgtactcgagaatggcaacgagctacggcgcacagttgcacgcattacca
ccgaggccaccagcgccggggcagcccccctctgggccgggcgcgcagcgcagtggttac
cacaacgtcccgcctcccaaggggccggcggcgcaaccgaagaacaaggcgaagggcaag
aacataccgcaaagccacaagaagagagcagcgatgcagcagcagcagccgccgccccag
tcacagggctcgtcccaacaacagcacggctcgagagcaaaccagcgaaggggtaacggt
acaagtaggagacccagacggggcggcaaacagggctag
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