Variovorax sp. PMC12: C4F17_03135
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Entry
C4F17_03135 CDS
T05380
Name
(GenBank) ABC transporter
KO
K02003
putative ABC transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_03135
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
C4F17_03135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
nSTAND1
Zeta_toxin
AAA_23
AAA_33
AAA_16
AAA_28
FtsK_SpoIIIE
AAA_25
NACHT
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AVQ80026
UniProt:
A0A2P1V4E3
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Position
1:694651..695361
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AA seq
236 aa
AA seq
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MSQPPSDAIVAVEHVFKSVTDSAGTLDILQDIHFTLGARETAAIVGASGSGKSTLLSIIA
GLDTPTRGTVRLAGDDLFAIDEDERAAVRAKRVGFVFQSFQLLGNLSALENVMLPLELAN
RKDARKAATEMLGRVGLGQRLGHYPKVLSGGEQQRVALARAFVVQPSLLLADEPTGSLDF
ATGEQVMKLMFDLNRELGTTLVLVTHDRGIADRCERRITIEAGRVAGNEKAAVAPG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaacccccgtctgatgccattgtcgccgtcgagcatgtcttcaagtccgtgacc
gactcggccggcacgctggacattctgcaggacatccatttcaccctcggcgcgcgggag
accgcggccatcgtcggcgcctcgggttcgggcaagagcaccttgctgtcgatcatcgcg
gggctggacacgcccacgcgcggcaccgtcaggctcgcgggcgacgatctgttcgccatc
gacgaggacgagcgcgccgccgtgcgcgcgaagcgcgtgggcttcgtgttccagagcttc
cagctgctgggcaacctcagcgcgctcgagaacgtcatgctcccgctggagcttgccaac
cgcaaggacgcccgcaaggcggccaccgaaatgctcggccgcgtcgggctgggccagcgg
ctcgggcactacccgaaggtgctctcgggcggggagcagcagcgcgtggcgctggcgcgg
gccttcgtcgttcagccttcgctgctgctggccgacgagcccaccggcagcctggacttc
gccaccggcgagcaggtcatgaagctcatgttcgacctcaaccgcgaactgggcaccacg
ctcgtgctcgtcacgcacgaccgcggcatcgccgatcggtgcgaacggcgcatcacgatc
gaggccggaagggtggcaggtaatgaaaaagctgccgtagcgcccggctga
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